Pairwise Alignments

Query, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 391 a.a., MFS transporter from Rahnella sp. WP5

 Score =  302 bits (774), Expect = 1e-86
 Identities = 172/379 (45%), Positives = 238/379 (62%), Gaps = 11/379 (2%)

Query: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71
           L AL I AF IGTTEF  +GL+P IAQ + VS+PSAG+L++ YA+GV +GAP++T L SR
Sbjct: 5   LLALTISAFAIGTTEFVIVGLVPTIAQQLGVSVPSAGLLVSIYALGVAIGAPVLTALTSR 64

Query: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131
             ++A L+ LM +FTLGNLL+  SP+Y TL+ +RL+T L HG FF +G+ +A S+V KEK
Sbjct: 65  VPRKALLIGLMVLFTLGNLLAWQSPNYSTLVMARLLTGLAHGVFFSIGSTIATSLVAKEK 124

Query: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKGERG 191
            ASA+A MF GLT+A + GVP  T+IGQ  GWR  F   +V+G++A+ A    +P   + 
Sbjct: 125 AASAIALMFGGLTVALVTGVPLGTFIGQHFGWRETFLAVSVIGVVAIIASAILVPNNIKN 184

Query: 192 S-VPHVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVL 250
                +  ++ V+  P +LL  A T LG G +FT +T++AP++ E  G S   V+  L+ 
Sbjct: 185 KPASRIVDQVKVLMNPRLLLIYAITALGYGGVFTTFTFLAPMMQEQAGFSASMVSWILLA 244

Query: 251 IGVGFTLGNSLGGRLADWSLDGAAK---IFLAVLALIMLAMPLVLGSHIGAAIALLVWGM 307
            GV   +GN  GG+LAD    GA K   I  A LA+++L      G  I A I LLV G+
Sbjct: 245 YGVSVAIGNIWGGKLAD--RHGAVKALTIIFAALAVLLLIFQFTSGFGIPALITLLVMGI 302

Query: 308 FTFAVVPPLQMRVMTAAIE----APGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAV 363
           F F  VP LQ+ V+  A E    A  +AS +N+ AFN+G A+G+ +GG V+S  LG A  
Sbjct: 303 FAFGNVPGLQVYVVQKAEEVTPNAVDVASGLNIAAFNVGIALGSVIGGQVVS-TLGLAQT 361

Query: 364 PMAGGVLAAAGLLLVWLGG 382
           P  G V+ A  LLL+ L G
Sbjct: 362 PWIGAVIVAGALLLICLSG 380



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 6/173 (3%)

Query: 10  RVLFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLF 69
           R+L   AI A G G    T   L P++ +    S      ++ AY + V +G      L 
Sbjct: 201 RLLLIYAITALGYGGVFTTFTFLAPMMQEQAGFSASMVSWILLAYGVSVAIGNIWGGKLA 260

Query: 70  SRFGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAF-FGLGAVVAASVVP 128
            R G   AL  + A   +  L+   +  +       L+T L  G F FG    +   VV 
Sbjct: 261 DRHGAVKALTIIFAALAVLLLIFQFTSGFG---IPALITLLVMGIFAFGNVPGLQVYVVQ 317

Query: 129 KEKQASAVAT-MFMGLTIANIG-GVPAATWIGQQIGWRMAFAGTAVLGLLAMA 179
           K ++ +  A  +  GL IA    G+   + IG Q+   +  A T  +G + +A
Sbjct: 318 KAEEVTPNAVDVASGLNIAAFNVGIALGSVIGGQVVSTLGLAQTPWIGAVIVA 370