Pairwise Alignments

Query, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 398 a.a., MFS transporter from Rahnella sp. WP5

 Score =  266 bits (681), Expect = 6e-76
 Identities = 142/380 (37%), Positives = 219/380 (57%), Gaps = 5/380 (1%)

Query: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71
           +FALA+G FGIGT EF  MGLLP +A+ + +S P AG  I +YA+GV+VGAP++ +L +R
Sbjct: 20  IFALALGGFGIGTGEFIIMGLLPGVAESLNISEPQAGNAIASYALGVVVGAPVIAVLAAR 79

Query: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131
             ++  L+ LMA+F +GN++S+ S  YY L+ +R +T L HGAFFG+ ++VAAS+V  EK
Sbjct: 80  MARKKLLLCLMAVFFIGNIVSAFSGSYYQLIGARFLTGLPHGAFFGVASLVAASLVTPEK 139

Query: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKGERG 191
           +  A++ + +GLTIA + GVP  +WIGQ   W + F     +G L    +   +P     
Sbjct: 140 RGRALSALMLGLTIATLVGVPLGSWIGQVFNWHVVFGFVGAIGFLTCVLILRFVPMTANE 199

Query: 192 SVPHVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVLI 251
           S  H  +EL  +    VLL +    +G G MF +++Y+AP L  + G   G +   +   
Sbjct: 200 SNAHPLRELEALKNSQVLLTLLVGAIGFGGMFAVFSYIAPTLINVAGMPAGLIPWAMTAF 259

Query: 252 GVGFTLGNSLGGRLADWSLDGAAKIFLAVLALIMLAMPLVLGSHIGAAIALLVWGMFTFA 311
           G+G   GN +GGRLA+ ++       L    LIM A PL L +H+   +        +  
Sbjct: 260 GLGMISGNLVGGRLAEKTVLKVIGWTLLWNILIMAAFPL-LATHVATGMIATFLIGTSSV 318

Query: 312 VVPPLQMRVMTAAIEAPGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAVPMAGGVLA 371
           ++P LQ+R+M  A ++  LA+++N  A N+ NA+GA LGG  +S   G+ +    G  L 
Sbjct: 319 LLPSLQIRLMDVANDSQTLAAAMNHSALNIANAMGAWLGGLAVSSGFGWISTAYVGVFLG 378

Query: 372 AAGLLL----VWLGGRHKVA 387
             GL++    VW  GR + +
Sbjct: 379 ITGLVVYAVTVWHAGRRQTS 398



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 41/203 (20%)

Query: 4   QTMRPGRVLFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGM-------LITAYAI 56
           + ++  +VL  L +GA G G       G+  V +      I  AGM        +TA+ +
Sbjct: 209 EALKNSQVLLTLLVGAIGFG-------GMFAVFSYIAPTLINVAGMPAGLIPWAMTAFGL 261

Query: 57  GVMVGAPIMTLLFSRFGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFF 116
           G++ G        +  G R A   ++ +     L + L    + LLA+ + T +      
Sbjct: 262 GMISG--------NLVGGRLAEKTVLKVIGWTLLWNILIMAAFPLLATHVATGMIATFLI 313

Query: 117 GLGAVVAASV------VPKEKQASAVATMFMGLTIANIGGVPAATWIG-----QQIGW-R 164
           G  +V+  S+      V  + Q  A A     L IAN  G     W+G        GW  
Sbjct: 314 GTSSVLLPSLQIRLMDVANDSQTLAAAMNHSALNIANAMG----AWLGGLAVSSGFGWIS 369

Query: 165 MAFAGT--AVLGLLAMA-ALWYA 184
            A+ G    + GL+  A  +W+A
Sbjct: 370 TAYVGVFLGITGLVVYAVTVWHA 392