Pairwise Alignments

Query, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 395 a.a., efflux transmembrane protein from Herbaspirillum seropedicae SmR1

 Score =  343 bits (879), Expect = 6e-99
 Identities = 178/380 (46%), Positives = 243/380 (63%)

Query: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71
           L+AL I AF IGTTEF  MGLLP +A  + VS+ SAG+L+T YA+GV VGAP++T    R
Sbjct: 5   LWALTISAFAIGTTEFVIMGLLPEVAANLGVSLSSAGLLVTGYALGVFVGAPLLTATTGR 64

Query: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131
             ++  L+ALM +F +GNL  +++PDY TL+  R+V S  HGAFFG+G+VVA S+VPKEK
Sbjct: 65  LPRKTLLVALMVVFVVGNLACAIAPDYTTLMIGRVVASFAHGAFFGVGSVVATSLVPKEK 124

Query: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKGERG 191
           QASA+A MF GLT+AN+ GVP  TW+GQ  GWR  F    V+G++A+AA    +P+ + G
Sbjct: 125 QASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPRSQGG 184

Query: 192 SVPHVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVLI 251
                 KE+ V+ RP V+L +  TVLG G +F  +TY+AP+L +L+G     V+  L+L 
Sbjct: 185 EETDFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDLSGFPASAVSPILLLF 244

Query: 252 GVGFTLGNSLGGRLADWSLDGAAKIFLAVLALIMLAMPLVLGSHIGAAIALLVWGMFTFA 311
           G+G  +GN  GG+LAD  L       L +LA +++   L + + + A I + + GM  FA
Sbjct: 245 GLGLVIGNLAGGKLADKKLMATLLGSLVLLAAVLVLFGLTVDNKVAAIIGVGLMGMAAFA 304

Query: 312 VVPPLQMRVMTAAIEAPGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAVPMAGGVLA 371
            VPPLQMRV+  A  AP LASS N+ AFNLGNA GA LGG  I    G  AVP    +L 
Sbjct: 305 TVPPLQMRVLEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHAVPYVAALLP 364

Query: 372 AAGLLLVWLGGRHKVAGKTA 391
            AG+++  +  +      TA
Sbjct: 365 LAGIVVALVSWKMDAGRATA 384