Pairwise Alignments

Query, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 398 a.a., major facilitator transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  276 bits (707), Expect = 6e-79
 Identities = 149/378 (39%), Positives = 228/378 (60%), Gaps = 9/378 (2%)

Query: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71
           L AL + AF IGTTEF  +GL+P +AQ ++VS+PSAG+L++ YA+GV VGAP++T L   
Sbjct: 5   LLALTLSAFAIGTTEFVIVGLIPTMAQDLQVSLPSAGLLVSLYALGVAVGAPVLTALTGH 64

Query: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131
           + ++  L+A+M +F  GN+L+  +P Y TL+A+R++T L HG FF +G+ +A  +VPKEK
Sbjct: 65  WNRKHVLLAVMTLFVSGNVLAWQAPSYETLIAARVITGLAHGVFFSIGSTIATGLVPKEK 124

Query: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKG-ER 190
            ASA+A MF GLT+A + GVP  T+IGQ  GW+  F   A+LGL+A+    + +P   ++
Sbjct: 125 AASAIAIMFTGLTVALVTGVPLGTYIGQSFGWQSTFLAVALLGLIALIGSAFLVPNNLKQ 184

Query: 191 GSVPHVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVL 250
                +  +  V+  P +LL  A T +G G  F  +T++AP+L +++G     +   +++
Sbjct: 185 TRAASLLTQAKVLTEPRLLLVFAITAIGYGGTFVAFTFLAPILQQISGFDASAIGAIMLV 244

Query: 251 IGVGFTLGNSLGGRLAD--WSLDGAAKIFLAVLALIMLAMPLVLGSHIGAAIALLVWGMF 308
            GV   +GN  GG++AD    +     IF   LA ++        + I A + +LVWG F
Sbjct: 245 YGVSVAIGNIWGGKMADNMGPIKALTYIFTG-LAAVLFIFHFTALNPITAVLTILVWGAF 303

Query: 309 TFAVVPPLQMRVM----TAAIEAPGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAVP 364
            F  VP LQ+ V+    T A  A  +AS +N+ AFN+G A+G A GG +I   +G    P
Sbjct: 304 AFGNVPGLQVYVVKLAETYAPTAVDVASGLNIAAFNIGIALG-AWGGGLIVEQMGLMQTP 362

Query: 365 MAGGVLAAAGLLLVWLGG 382
           + G ++  A LLL  L G
Sbjct: 363 LIGSLVVIAALLLTRLSG 380



 Score = 38.5 bits (88), Expect = 3e-07
 Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 10/183 (5%)

Query: 3   AQTMRPGRVLFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGA 62
           A+ +   R+L   AI A G G T      L P++ Q       + G ++  Y + V +G 
Sbjct: 194 AKVLTEPRLLLVFAITAIGYGGTFVAFTFLAPILQQISGFDASAIGAIMLVYGVSVAIGN 253

Query: 63  PIMTLLFSRFGKRAALMALMAIFTLGNLLSSLSPDYYTLL--ASRLVTSLNHGAF-FGLG 119
                +    G    + AL  IFT   L + L   ++T L   + ++T L  GAF FG  
Sbjct: 254 IWGGKMADNMG---PIKALTYIFT--GLAAVLFIFHFTALNPITAVLTILVWGAFAFGNV 308

Query: 120 AVVAASVVP-KEKQASAVATMFMGLTIANIG-GVPAATWIGQQIGWRMAFAGTAVLGLLA 177
             +   VV   E  A     +  GL IA    G+    W G  I  +M    T ++G L 
Sbjct: 309 PGLQVYVVKLAETYAPTAVDVASGLNIAAFNIGIALGAWGGGLIVEQMGLMQTPLIGSLV 368

Query: 178 MAA 180
           + A
Sbjct: 369 VIA 371