Pairwise Alignments

Query, 797 a.a., putative usher protein from Pseudomonas putida KT2440

Subject, 831 a.a., Outer membrane usher protein FIMD from Pseudomonas fluorescens FW300-N2E2

 Score =  101 bits (252), Expect = 1e-25
 Identities = 169/743 (22%), Positives = 289/743 (38%), Gaps = 104/743 (13%)

Query: 69  PRVDLIPVQQRAGRLYLDSDVLRAAGVSLPGNPQGEVALDS--------IAGLHTDYDSQ 120
           P  DL+P         L SD+L+  GV L G    + AL++        I G + +++  
Sbjct: 94  PEGDLLPC--------LSSDLLQELGVRLDGLADNQ-ALNTDCIDLASVIPGANIEFEGA 144

Query: 121 NQRLLLQVPPAWLPEQQVG-------DRNL------YPASDARSSF---GALFNYDLYIN 164
              L L VP   +   Q G       D  +      Y  S  +S+    G+  + DLY+N
Sbjct: 145 KLWLSLSVPQIAMRRNQSGYADPERWDHGINAAFINYQVSAQQSNHQQGGSSQSDDLYLN 204

Query: 165 DTDEGGTYLAAWNELRLFDSWGTFSSTGQWRQSFKGAQADDTRRGFMRYDTTWRFTDEQR 224
                G  L AW             +  +W  ++  AQ D    G     T         
Sbjct: 205 S----GLNLGAWRLRSNQTLRRNEQNQREWSSAYTYAQRD--LPGLQANLTLGE------ 252

Query: 225 LLTYEAGDFVTGALPWSSSVRVGGVQLSRDFAARPDLVTYPLPAFAGEAAVPTSLDLFIN 284
             T+  GD V  +LP      + G  ++ D    PD +    P   G A     L++  N
Sbjct: 253 --TFTRGD-VFRSLP------IKGAIIASDPDMLPDALQGYAPVIRGVAQTRAKLEVLQN 303

Query: 285 GFKSSTTELQPGPYTLTNVPFINGVGEAVVVTTDALGRQVSTTLPFYVTSSLLQKGLSDY 344
           G+   +T + PG Y + ++  + G GE  +V T+A G+    T P+   S+LL++ L  Y
Sbjct: 304 GYPIYSTYVSPGAYEIDDLTTVGGSGELEIVLTEADGQVHRYTQPYATLSNLLREDLWRY 363

Query: 345 SVAAGSLRRDYGVRDFSYGPGIASGSLRYGLSDMFTLETHAETAESLMLGGLGGNMRVGN 404
           S   G     Y        P +  G+L +GL    TL   A  ++      LG +  +G 
Sbjct: 364 SATVG----HYNAISEGDHPLLWQGTLAWGLGWSTTLYGGAMGSDFYRAVTLGASRDLGA 419

Query: 405 FGVLNAALAQSRFEGD-----KGHQVALGYQYNS-QRIGFGYQRLQRHG--DYADLSRVV 456
            G L   L+ S  +       K + V  G  + S  ++ F   R    G  D+ +  R  
Sbjct: 420 LGALALDLSHSDTQASQDVQGKSYSVKYGKSFQSGTQLRFAGYRYSTEGYRDFDEAVRDR 479

Query: 457 SPDMQL---SKSSEQVTLSVNLNEYGSIGAGYFDVRAGDGTRT-RLINLSYSKPLWG-SS 511
             D++     +S  +  ++  + ++ S+   +          T R    +++    G + 
Sbjct: 480 EHDVRFFGSRRSRLEAAINQKIGKHSSVNLTFSHQDYWQTNNTQRQFQFNFNTQHKGVTY 539

Query: 512 SVY-LSANREVGDSQWAVQAQL----VIPFDLHGTLALSME-RSNEGETLQRVNYSRAVP 565
           +VY L + R+      + Q Q+     +P D   +   + + ++N G   QR + S    
Sbjct: 540 NVYALQSLRDNDKRNMSEQRQMGLSVSLPLDFMPSSTATFDVQNNAGRHSQRASLS---- 595

Query: 566 AGVGVGYNLGYAAGSDRDAYRQADVTWRLQSVQLQAGTYGSSGEM-----------TRWA 614
            G  +   L Y      D+ ++       QS +L  G  G++G +           T   
Sbjct: 596 -GNSLENRLNYRTSISHDSQQR-------QSAELALGYQGATGSVGAGITQSSHYRTTSL 647

Query: 615 DASGSLVWMDAGVFAANRIDDAFVVVSTAGYADVP-VRYENQEIGRTDAKGHLLVPYSSG 673
           +ASG+L+    G+ A   + +   +V      D+P V  +N    +T+A+G  LVPY   
Sbjct: 648 NASGALLLHADGIEAGPYLGETLALVEV---PDIPGVGVKNATGVKTNAQGFALVPYLRP 704

Query: 674 YYRGKYEIDPMNLPPDVLAPDVEQRVAVRRGSGYLLEFPLKRVMAASVELVDGNQQVLKL 733
           Y   +  +   +L P++   +   +V  RRG+     F  + +    +     N Q L  
Sbjct: 705 YRMNQVSLQTDDLGPEIEIDNGTAQVVPRRGAVVKTTFTARTINRLLISGQTANGQALPF 764

Query: 734 GSRVTHAESGTQAVVGWDGLVYL 756
           G++V+ A+      VG  G V L
Sbjct: 765 GAQVSDAQGTVLGTVGQAGQVLL 787