Pairwise Alignments

Query, 797 a.a., putative usher protein from Pseudomonas putida KT2440

Subject, 886 a.a., fimbrial biogenesis outer membrane usher protein from Burkholderia phytofirmans PsJN

 Score = 93.6 bits (231), Expect = 4e-23
 Identities = 161/743 (21%), Positives = 269/743 (36%), Gaps = 73/743 (9%)

Query: 86  DSDVLRAAGVSLPGNPQGEVALDS-IAGLHTDYDSQNQRLLLQVPPAWLPEQQVGDRNLY 144
           D+ V+         +P   ++L + I     D+D   Q+LLL VP  ++     G     
Sbjct: 138 DAKVVATGTAEADPDPDECISLAAKIPAATVDFDFTEQKLLLSVPQKFMRNTARGYVPPD 197

Query: 145 PASDARSSFGALFNYDLYINDTDEGGTYLAAWNELRL-----FDSWGTFSSTGQWRQSFK 199
              D  ++    +N + Y +    G    +  N L L       SW     +   +QS  
Sbjct: 198 MWQDGVNAAFVSYNANTYYS---RGSGVQSTQNYLGLNAGVNLGSWHFRHQSSVTQQSGT 254

Query: 200 GAQADDTRRGFMRYDTTWRFTDEQRLLTYEAGDFVTGALPWSSSVRVGGVQLSRDFAARP 259
           G   DD    ++++D         +        F TG +    SV+  G Q++ D    P
Sbjct: 255 GTNFDDIAT-YLQHDL-----GALKSQVIVGDGFTTGDV--FDSVQFRGAQIATDDRMLP 306

Query: 260 DLVTYPLPAFAGEAAVPTSLDLFINGFKSSTTELQPGPYTLTNVPFINGVGEAVVVTTDA 319
           + +    P   G A     + +  NG     T + PG + + ++      G   V  T+A
Sbjct: 307 ESLRGYAPVVRGIAESNARVTVRQNGQVIYETTVSPGAFEINDLYPTGYGGNLDVTVTEA 366

Query: 320 LGRQVSTTLPFYVTSSLLQKGLSDYSVAAGSLRRDYGVRDFSYGPGIASGSLRYGLSDMF 379
            GR+ + T+ +   +  L+ G++ +SV AG LR           P  A  +L+ GL+++ 
Sbjct: 367 DGRKKNFTVAYASVAQSLRPGITRFSVTAGQLRSS----TLETKPNFAQFTLQRGLTNLV 422

Query: 380 TLETHAETAESLMLGGLGG--NMRVGNFGV-LNAALAQSRFEG-DKGHQVALGYQY---- 431
           TL      +   +   +G   N + G F   +  A  Q   +G  +G  + +GY      
Sbjct: 423 TLYGGGVASTGYVAAQMGTALNTKFGAFSADVTGAQTQVPNQGTSRGTSLRVGYSKFIDP 482

Query: 432 NSQRIGFGYQRLQRHGDYADLSRVVS-PDMQL----------SKSSEQVTLSVNLNEYGS 480
            +  I     R    G Y DLS   S  D+ L           ++  Q+TL+ +  +YG+
Sbjct: 483 TNTNIAIAAYRYSTAG-YMDLSDAASVRDLALRGGDPASVYRERNRFQLTLNQSFKKYGT 541

Query: 481 I-----GAGYFDVRAGD-------------GTRTRLINLSYSKPLWGSSSVYLSANREVG 522
           +        Y++    D             GT +     + S     S  + L A   +G
Sbjct: 542 VFLNASAQQYWNRNGSDVFYQAGYTKAFKSGTYSITAGRTRSSNGVMSDQIMLGATLPLG 601

Query: 523 DSQWAVQAQLVIPFDLHGTLALSMERSNEGETLQRVNYSRAVPAGVGVGYNLGYAAGSDR 582
             Q   QA L+           +M+ S  G   +R  YS         G+          
Sbjct: 602 RGQ---QAPLMATNLSSSGGNANMQTSVSGALGERSQYSYNAYGTYSTGHGSSTGNAGVS 658

Query: 583 DAYRQADVTWRLQSVQLQAGTYGSSGEMTRWADASGSLVWMDAGVFAANRIDDAFVVVST 642
            AY       R    QL       +G     A  SGS+V    GV  +  + D F V+  
Sbjct: 659 GAY-------RAPYAQLTGSASAGTGSNQASAGVSGSIVAHPGGVTFSQTVSDTFGVIEA 711

Query: 643 AGYADVPVRYENQEIGRTDAKGHLLVPYSSGYYRGKYEIDPMNLPPDVLAPDVEQRVAVR 702
            G A   V   +    + D +G+ +VPY + Y     +IDP     DV      ++   R
Sbjct: 712 PGAAGASV--SSAPGVKLDRRGYAVVPYLTPYGMNTVDIDPKGTSTDVEFESTSEQAVPR 769

Query: 703 RGSGYLLEFPLKRVMAASVELVDGNQQVLKLGSRVTHAESGTQAVVGWDGLVYLENLSSH 762
            GS  ++ +      AA +       + L  G+ V  A      VV  D  ++   L   
Sbjct: 770 FGSVVMIRYKTVTGRAALIRAPLLGDKALPFGADVVDANGLGVGVVAQDSRIFARRLEDS 829

Query: 763 NRLQV--ALEGGGHCEVAFDLPE 783
             L V   +     C++ + LP+
Sbjct: 830 GALFVKWGVSDAERCKIDYVLPK 852