Pairwise Alignments

Query, 755 a.a., putative Phytochrome family protein from Pseudomonas putida KT2440

Subject, 756 a.a., Bacteriophytochrome (light-regulated signal transduction histidine kinase) from Pseudomonas stutzeri RCH2

 Score =  931 bits (2407), Expect = 0.0
 Identities = 478/750 (63%), Positives = 567/750 (75%), Gaps = 8/750 (1%)

Query: 9   TADNSLADAMERCAQEPIQVPGSIQPHGFLLVLDATDLRVLQASENVEHWLGLPARELIG 68
           T    L  A++RCA EPI +PGSIQPHGFLLV+   +L V QASENV+ WLG+ A+ L+G
Sbjct: 4   TEARDLLAAIDRCADEPIHIPGSIQPHGFLLVVSEPELHVQQASENVQQWLGVEAQSLLG 63

Query: 69  CHFADLVHEGFDLHAHLTRLPEDEVFPFHIGDVRLRQGAPISALLHMLVHCHDQVLIAEF 128
              ++L+     L A L  L ED+  PFH+ DV +R    +     +L H H   LI EF
Sbjct: 64  QPLSNLLPTA-RLEAGLAALTEDDHNPFHLSDVCIRVHGTVDQTFALLGHRHGGHLILEF 122

Query: 129 EPPRLPADLVGQG--DYYPLVRSFVASLQVASSIEDLLQQTVLQLKRITGFGRVKAYRFD 186
           E     AD   Q     YPL+R+FV  LQ    +E L Q  V ++KRITGFGRVKAYRFD
Sbjct: 123 ER----ADNAHQAYDALYPLMRTFVVQLQETRELEALCQLAVREVKRITGFGRVKAYRFD 178

Query: 187 AEGNGQVLAEVVDPGYPSYAGLCFPAADIPRQARELYRVNRIRVIEDANYQPSPLLPATN 246
           AE NG VLAEV DPGYPSY GLCFPAADIP QAR LYR N IRVI+DANY PSPL+PA N
Sbjct: 179 AEDNGLVLAEVADPGYPSYLGLCFPAADIPPQARRLYRENLIRVIQDANYTPSPLVPALN 238

Query: 247 PRTGKPLDMSFAALRSVSPVHLQYMRNMGTLASMSLSIVVDGQLWGLISCHHQQPRPVDL 306
           P +G PLD+SFAALRSVSPVHLQYMRNMGTLASMS+SIV+  +LWGLISCH  +PR V  
Sbjct: 239 PVSGAPLDLSFAALRSVSPVHLQYMRNMGTLASMSISIVIRDRLWGLISCHDAEPRAVSY 298

Query: 307 RTRTACELLASVLSLQIESRESHASTRKLLTLRQHIVRMISSMADHDSVSDGLRDLPEVL 366
           +TRTACELL  +LSLQIE+RE+    ++ L LR  IV ++S+MAD DSV +G R LP+V+
Sbjct: 299 QTRTACELLGRILSLQIEARETETLAQRKLELRHQIVHLLSAMADRDSVVEGFRHLPDVV 358

Query: 367 LAFADAQGAAVISAERCDLIGQTPPEAQVTALVHWLGQRDEDKVFHSDNLRRDITELPEL 426
           L FA A GAA+ISA++C+ +G TP   Q+  L  WLG+R +  +FHSD +  DI E+PEL
Sbjct: 359 LGFAAADGAAIISADKCETVGNTPDHLQILRLTEWLGERRDQLIFHSDCISGDIPEMPEL 418

Query: 427 ANHAGGVLAVAISQIHSHYLLWFRPEQIRTVNWAGQPTKQVGPQ-GNLDPRHSFERWQEE 485
           A H  GV+A++IS++H+HYL+WFR EQI+TVNWAG P KQV  Q G L PRHSF RWQE 
Sbjct: 419 AGHCAGVMAISISRLHAHYLIWFRQEQIKTVNWAGAPEKQVDRQSGALSPRHSFARWQET 478

Query: 486 QRGYSQAWDPLVIEGVIELRAAVLGIVLRKAEELAQLAGELRRSNKELEAFSYSVSHDLR 545
            RGY+Q WDP+VIEG +ELR AVLGIVLRKAEE+AQLAGELR SNKELEAFSYSVSHDLR
Sbjct: 479 LRGYAQPWDPVVIEGALELRNAVLGIVLRKAEEMAQLAGELRASNKELEAFSYSVSHDLR 538

Query: 546 APLRHIAGYTELLGEIEGQGLSERGKRFLQHIGEAAHFAGSLVDNLLNFSQMGRSALRLS 605
           APLRHIAGYTELL E+E   LSERG RFL +I +AA FAG+LVDNLL+FSQMGR+ALRL+
Sbjct: 539 APLRHIAGYTELLSEMESSQLSERGMRFLDNIADAARFAGTLVDNLLSFSQMGRAALRLT 598

Query: 606 DVDLNALVEAIRSELAPDYEGRAIVWDIAPLPKVIGDPAFINMALHNLIANAIKYTRGRT 665
           DVDL ALV +IR ELAPD EGR I W + P+P V+ D AF++M L NLI NA+KY+R R 
Sbjct: 599 DVDLEALVASIREELAPDCEGRQIEWHLLPMPIVVADAAFLHMVLRNLIDNAVKYSRTRE 658

Query: 666 PARIEISAVQHPEETEVCIRDNGVGFDMAYANKLFGVFQRLHRMEDFEGTGIGLASVRRI 725
            A IE+ A Q   E  V +RDNGVGFDM YA KLFGVFQRLHRME+FEGTGIGLASV RI
Sbjct: 659 VAVIEVGAEQRAGEVVVYVRDNGVGFDMQYAGKLFGVFQRLHRMEEFEGTGIGLASVHRI 718

Query: 726 IERHDGRVWATGQVDQGASFHFTLPRNTAT 755
           IERHDGRVWA GQ+D+GA+F+F+LP+ T T
Sbjct: 719 IERHDGRVWAEGQLDKGATFYFSLPKLTYT 748