Pairwise Alignments

Query, 755 a.a., putative Phytochrome family protein from Pseudomonas putida KT2440

Subject, 865 a.a., Multi-sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  242 bits (617), Expect = 7e-68
 Identities = 173/483 (35%), Positives = 246/483 (50%), Gaps = 25/483 (5%)

Query: 21  CAQEPIQVPGSIQPHGFLLVLDATDLRVLQASENVEHWLGLPARELIGCHFADLVH-EGF 79
           C QEPI VPG +QPHGFL+VLD+   R+ Q +  +E   G+ A+ LIG     ++     
Sbjct: 17  CDQEPIHVPGLVQPHGFLVVLDSKSGRIAQVTPGIEAVAGVVAQRLIGEPLERVLDPRSA 76

Query: 80  DLHAHLTRLPEDEVFPFHIGDVRLRQGAPISALLHMLVHCHDQVLIAEFEPPRLPADLVG 139
               H    PE   +P  I    +R  AP       + H  DQ  + E         + G
Sbjct: 77  QRCRHRIARPE---YPHLIDPFPVR--APGGQSFSAVAHATDQADLVELWSDDQETTVEG 131

Query: 140 QGDYYPLVRSFVASLQVASSIEDLLQQTVLQLKRITGFGRVKAYRFDAEGNGQVLAEVVD 199
                P     +     A+SIEDL  +    +  +TG+ RV  YRF     G+V+AE ++
Sbjct: 132 VFGRLPFA---IGHASRAASIEDLCGRAAATVADLTGYERVMVYRFAENWEGEVIAETLN 188

Query: 200 PGYPSYAGLCFPAADIPRQARELYRVNRIRVIEDANYQPSPLLPATNPRTGKPLDMSFAA 259
               SY G  FPA+DIP QAR LY  N +R I D +Y+P PL+  +    G+ LDM+F  
Sbjct: 189 GPVESYKGQRFPASDIPAQARALYSRNLLRSIPDVHYRPLPLVGRSPD--GRELDMTFCN 246

Query: 260 LRSVSPVHLQYMRNMGTLASMSLSIVVDGQLWGLISCHHQQPRPVDLRTRTACELLASVL 319
           LRSVSPVHL+Y+RNMG  AS S+S+VVDG+LWGL++CH + PR + L T  AC++ A  +
Sbjct: 247 LRSVSPVHLEYLRNMGVAASFSVSLVVDGRLWGLVACHDRVPRRLSLATMGACQVYAETI 306

Query: 320 SLQIESRESHASTRKLLTLRQHIVRMISSMADHDSVSDGLRDLPEVLLAFADAQGAAVIS 379
           + Q+   ++   +R        I  +   +    S+++ L    +  LA   A   AVIS
Sbjct: 307 AQQVLRLDNTRRSRHRSRTGDLIDDISVLLGSGRSLAEALDYTLDDTLALFGA-SRAVIS 365

Query: 380 AERCDLIGQTPPE-AQVTALVHWLGQRDEDKVFHSDNLRRDITELPELA-NHAGGVLAVA 437
            +      + P E A +    H        ++  S+ L   +    ELA +  GGVL   
Sbjct: 366 LDGRQWTAEGPLEGAPIQVPPH-------QRLLLSERLGGRLRLPAELAGSFVGGVLLPL 418

Query: 438 ISQIHSHYLLWFRPEQIRTVNWAGQPTKQ--VGPQGNL--DPRHSFERWQEEQRGYSQAW 493
             Q    +LL  RPE +R++ WAG+P KQ  + P+G L   PR SF  W+EE RG S A+
Sbjct: 419 SDQPDRDFLLLGRPETLRSIEWAGRPEKQPEITPEGGLKIHPRTSFSLWREEVRGRSVAF 478

Query: 494 DPL 496
           DPL
Sbjct: 479 DPL 481



 Score = 42.0 bits (97), Expect = 1e-07
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 574 LQHIGEAAHFAGSLVDNLLNFSQMGRSALRLSDVDLNALVEAIRSELAPDYEGRAIVWDI 633
           L  I E    A  +V ++L F++    A R   V   AL  ++ +  A  + G  I+ DI
Sbjct: 688 LADICEGGARAKDIVRSVLTFARQ-TPAERRPLVLAPALARSV-AFAAKGHPGLEIITDI 745

Query: 634 APLP-KVIGDPAFINMALHNLIANAIKYTRGRTPARIEISAVQHPE--ETEVCIRDNGVG 690
                ++  +   ++  + NL+ NA     GR   R+ +S  + P+     + IRD G G
Sbjct: 746 PDTAGEIAANSTELSQIVLNLVGNAADAMGGR--GRVFVSLAEAPDLGRMVITIRDEGPG 803

Query: 691 FDMAYANKLFGVFQRLHRMEDFEGTGIGLASVRRIIERHDGRVWATGQVDQGASFHFTLP 750
             +    ++F  F       +  GTG+GLA V  ++E   G +        G  F  + P
Sbjct: 804 MTLQTQARVFEPF--FTTKPEGSGTGMGLAVVHGLVEAWGGTIGLESAPGSGTKFVISFP 861

Query: 751 RN 752
            N
Sbjct: 862 IN 863