Pairwise Alignments

Query, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

Subject, 279 a.a., CBS domain-containing protein from Methanococcus maripaludis JJ

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 3/122 (2%)

Query: 245 MSRDVQFATPDTTLEQAWKMLASHHLKTLPVLQHGKLVGIVSLSDLV---GPAMQRGRFS 301
           M+ +V  ATP   L+   + +  +  + LPV+   KLVGI++ +D V   G         
Sbjct: 152 MTENVVSATPGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFGSDWAFNHMK 211

Query: 302 WRGLFGRQAVRMAQVMSRRVVSVSSQHPLERLLPLLCEQGLHCLPVLDGDKLVGVITQTD 361
              +     VR+  +M   +VSV+S   L   +  + E  +  LPV+DG+KL+G+IT+ D
Sbjct: 212 TGNIREITNVRIQDIMKTDIVSVTSDIKLIDAIKKMNELNIGVLPVVDGEKLIGLITEKD 271

Query: 362 LI 363
           ++
Sbjct: 272 IV 273



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 16/58 (27%), Positives = 29/58 (50%)

Query: 234 RSLGGITAASVMSRDVQFATPDTTLEQAWKMLASHHLKTLPVLQHGKLVGIVSLSDLV 291
           R +  +    +M  D+   T D  L  A K +   ++  LPV+   KL+G+++  D+V
Sbjct: 216 REITNVRIQDIMKTDIVSVTSDIKLIDAIKKMNELNIGVLPVVDGEKLIGLITEKDIV 273