Pairwise Alignments

Query, 384 a.a., nitrite transporter, HPP family (from data) from Pseudomonas putida KT2440

Subject, 159 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.2 bits (152), Expect = 5e-15
 Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 12/167 (7%)

Query: 10  LQRLLPASLNIPPKEWLRAGIGALLGLFLAGWLTSLAYGPSIALHLLGPLAASAVLVFAV 69
           +QR+ P +L +     L AG GA+L +     L  L       + L+ P  A+ VL+FA+
Sbjct: 1   MQRINPQNLKMA----LLAGCGAMLCISSLAALEQLT---PQTIWLMAPFGATMVLLFAL 53

Query: 70  HSGPLAQPWPVLGSYALAGAVGLAMREGFGPELWVAAAALGISILVMCLLRCLHPPGGGV 129
              PLAQP  +L  + L   VGL +    G        A+G+ I VM L   +HPP G  
Sbjct: 54  PESPLAQPRNILCGHLLTSLVGLIILNTLGVSPLTLGLAVGLGIAVMMLTHTVHPPAGAN 113

Query: 130 AVSAVLADPGLTALGDHLLEPVLLN-ALILVTVAIAYNRLTGVRYPK 175
            +  +L         D L  PV    ALIL    + +N L   +YP+
Sbjct: 114 PLVVMLT----AQHWDFLYMPVASGVALILAFGWLYHNLLCSRQYPQ 156