Pairwise Alignments

Query, 439 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 449 a.a., sensor protein PhoQ (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  137 bits (344), Expect = 9e-37
 Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 10/310 (3%)

Query: 128 YRRLGQDISISVAQDYSPVREGFRRLQQIGLGMGLVALILILVLQRITVTRSLRPLERAR 187
           Y  L    +  + Q+YS     F +   I L M ++AL LIL++        +RPL R +
Sbjct: 147 YNLLVMKDAAKLEQEYSK----FSKRTYIRLAM-VLALALILLVS--AAYWGMRPLVRMQ 199

Query: 188 QQIAQLQQGQRSQLDAEVPSELVPLVGQINHLLSHTEDSLRRSRNALGNLGHALKTPLAV 247
            ++  + QG+   L    P EL  +   +N LL  +    +R +NA+ +L H+LKT LA 
Sbjct: 200 NELQSINQGKTKSLSEGYPVELEGVTQALNQLLQQSSAQQQRYQNAMNDLAHSLKTRLAA 259

Query: 248 LLSLASSDRLQGLPEVRAQMREQLQQIQERLARELNRARLAGDALPGAQFDCDAELPGLL 307
           + ++     L        ++ EQ+ Q+ + +  +L RA L    L          +  L 
Sbjct: 260 VHAITDDTSLNK-QSANEKIMEQISQMDQLVKYQLKRAMLGRQGLKQEHTPIAPLVEQLA 318

Query: 308 GTLGMIHGEGLL-LASDVSPGLLLPWDREDVLELLGNLLDNACKWADSEVRVGIASNAEG 366
             L  I+ +  +   +++S  LL P ++ D++EL GNL++NA +   S+V+V    N +G
Sbjct: 319 QMLFKIYRDKQVQFKANISANLLFPGNKGDLMELCGNLMENAFRLCISQVQVTAHFNEQG 378

Query: 367 -YRLWVDDDGPGIAQDQRQQVLERGSRLDEQVAGHGLGLGIVRDIVDAWGGRLALLESPL 425
            + L V+DDGPG+ +  RQ++++RG R D Q  G G+GL +  +IV ++GG L + ES L
Sbjct: 379 DFELIVEDDGPGVEEQLRQKIIQRGVRADTQSPGQGIGLAVCDEIVSSYGGSLKIEESHL 438

Query: 426 GGLRVSIDLP 435
            G    I +P
Sbjct: 439 EGALFRITIP 448