Pairwise Alignments

Query, 228 a.a., putative ABC transporter - ATP binding subunit from Pseudomonas putida KT2440

Subject, 229 a.a., lipoprotein releasing system ATP-binding protein LolD (RefSeq) from Shewanella amazonensis SB2B

 Score =  193 bits (490), Expect = 3e-54
 Identities = 103/223 (46%), Positives = 146/223 (65%), Gaps = 2/223 (0%)

Query: 1   MSPSILVAQNLSKVVPSAEGDLTILHALSLDLAQGDSLAIVGASGSGKSTLLGLLAGLDR 60
           M   +L  +N+SK     + +  +L  + L + +G+ LAIVG SGSGKSTLL ++  LD+
Sbjct: 1   MQDILLKVENVSKTYREGKLETQVLCGVDLSVYRGEQLAIVGGSGSGKSTLLHIMGSLDK 60

Query: 61  PSAGSVMLAGHDLGPLDEDQRARVRAEHVGFVFQSFQLLDSLNALENVMLPLELDG--RR 118
           P++G V+L G DL  L   ++A++R   +GF++Q   LL   +ALENV +P  + G  ++
Sbjct: 61  PTSGKVLLEGEDLYSLSAARQAQIRNASLGFIYQFHHLLPEFSALENVAMPARIAGVDKK 120

Query: 119 DAREQARTLLERVGLGKRLSHTPRQLSGGEQQRVAIARAFAAQPAVLFADEPTGNLDSHT 178
            A  +A  LLERVGL  RLSH P +LSGGE+QRVAIARA   QP ++ ADEPTGNLD+ +
Sbjct: 121 TAFGRAEALLERVGLSHRLSHAPSELSGGERQRVAIARALINQPRLVLADEPTGNLDAAS 180

Query: 179 GERISDLLFELNKERGTTLVLVTHDERLARRCRRQIRLDAGRL 221
           GE +  L+ EL  + GT  V+VTHD  LA R  RQ+ + +G+L
Sbjct: 181 GEAVYALIRELAAQLGTAFVVVTHDNALAARMDRQLSMKSGKL 223