Pairwise Alignments

Query, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  238 bits (607), Expect = 5e-67
 Identities = 145/350 (41%), Positives = 214/350 (61%), Gaps = 2/350 (0%)

Query: 143 AVCVLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLASGDEVGQMAGA 202
           A+CV I+ L +L A   + R L   +++L  V   + + GDLSARV + S DEV  +A  
Sbjct: 327 AMCV-IMGLLLLYAFCSIYRALRLTIDSLLGVTRRLGE-GDLSARVAVVSKDEVADIANG 384

Query: 203 FNAMQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATAINEMSAT 262
            N M   +   +S +  ++ +L   A+RL AS+   +  M  QQ+ET+Q ATAINEM+A+
Sbjct: 385 LNLMADAFASSISHMDRTSYELTDVASRLGASIGLAKQSMNAQQAETEQVATAINEMTAS 444

Query: 263 VHHIAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEMIRQLAEDSQKI 322
           V  +AQ+       +  A+T + +G  ++ +   +I  L+  V+ +A+ ++ LA  SQ I
Sbjct: 445 VADVAQNTEGAALAADEANTASRNGLRIMHQAHSTIQALAEEVELSAQKVQALALHSQSI 504

Query: 323 NGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITTMV 382
            GV+ VI +IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA R Q ST+EI  ++
Sbjct: 505 GGVIQVISTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTEEIRGII 564

Query: 383 SALQSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQS 442
             LQS T  AV+ MQ    KA  C+  A +A  +L+ I+  V ++ E NTQIA AA QQ 
Sbjct: 565 QQLQSATDAAVQQMQAGQQKAHACISAASDASGSLSSISQGVERIVEMNTQIASAAVQQH 624

Query: 443 QVAEEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAIGQLKL 492
            V+E++NR V+ IR+ +   +     +A T+ ELA +A ++   + + KL
Sbjct: 625 AVSEDINRNVMEIRNSSGTLMLGIDNNAVTADELARVASDMRNVVARFKL 674