Pairwise Alignments

Query, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 577 a.a., hypothetical ATP-dependent protease (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.9 bits (115), Expect = 8e-10
 Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 26/198 (13%)

Query: 590 IGQVTGL----AWTQVGGELLTIEAVVIPGKGQLI---KTGSLGDVMVESITAAQTVVRS 642
           +GQ+ GL    A     GE   I A V  G G++    +   LG     +I A   ++ S
Sbjct: 335 VGQINGLTVIDAIDHCYGEPARITATVHYGDGEVADIERKSELGG----NIHAKGMMILS 390

Query: 643 RA--RSLGIAADFHEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTG 700
               R  G  A  H   + +I   +     DG SA +     L+SA+ + P+   +A+TG
Sbjct: 391 ACLYRIFGRDAPLHL--NANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITG 448

Query: 701 EITLRGQVLAIGGLKEKL-----LAAHRG--GIKTVIIPEENVRDL----KEIPENIKQD 749
            +   G V AIGG+ EK+     L   RG  G + VI+P+ N+  L    K I    K  
Sbjct: 449 ALDQFGNVQAIGGINEKIEGFFNLCERRGLTGKQGVIMPKSNMLQLNLHSKVITAVGKGL 508

Query: 750 LQIKPVKWIDEVLQIALQ 767
             I  ++ +DE +++ +Q
Sbjct: 509 FHIYAIEHMDEAVELLMQ 526