Pairwise Alignments

Query, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 802 a.a., ATP-dependent protease La (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  932 bits (2409), Expect = 0.0
 Identities = 461/766 (60%), Positives = 596/766 (77%)

Query: 8   PLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGEKQILLLAQKNPADDDPGEDALYRV 67
           P+LPLRD+VV+PHM++PLFVGREKS+ ALE  M  +KQILL +Q +PA DDP  + ++  
Sbjct: 10  PVLPLRDIVVFPHMIVPLFVGREKSVRALEEVMKDDKQILLSSQIDPAVDDPTPEGIFAY 69

Query: 68  GTVATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERESEVFV 127
           G VA VLQLLKLPDGTVKVLVEG QR A+  +++ E    A   L++E           V
Sbjct: 70  GVVANVLQLLKLPDGTVKVLVEGRQRVAITEYTDNEDFFEAHAELLEEEAGDPDTLRALV 129

Query: 128 RTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIVDLTT 187
            ++ ++FE+Y ++ K VP E L+++    EP +L D ++ H+ +++ +KQE+LE + +  
Sbjct: 130 GSVSAEFERYAKIKKNVPEEALAAVAESTEPAKLADMVSGHLGIEVGRKQELLETLSVAE 189

Query: 188 RVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGHNEV 247
           R+E V  L+  E+ +LQVEK+I+ RVK QMER+QREYYLNEQMKAIQKELGDG++G NEV
Sbjct: 190 RLEKVYGLMQGEMSVLQVEKKIKSRVKSQMERTQREYYLNEQMKAIQKELGDGEDGANEV 249

Query: 248 EELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVPWKAQSKVRL 307
            EL+ RI    L K+A  KA+ E+ KLK MSPMSAEATVVR+YLDW++ +PW  +S+V+ 
Sbjct: 250 AELENRIAETKLSKEAREKAEGEIKKLKNMSPMSAEATVVRNYLDWMLSIPWGTKSRVKK 309

Query: 308 DLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAESIAA 367
           DL +A++ILD DHYGLE+VKERI+EYLAVQ+R KK++GP+LCLVGPPGVGKTSL +S+A 
Sbjct: 310 DLGRAQKILDTDHYGLEKVKERIVEYLAVQQRSKKLKGPILCLVGPPGVGKTSLGKSVAK 369

Query: 368 ATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKMGSD 427
           AT R+F+R++LGGVRDE+EIRGHRRTYIGSMPG++IQ + K    NPL LLDEIDKMG D
Sbjct: 370 ATGREFIRISLGGVRDESEIRGHRRTYIGSMPGKIIQALKKAKTTNPLILLDEIDKMGQD 429

Query: 428 MRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVIRLP 487
            RGDPASA+LEVLDPEQN  F DHYLEV+YDLS+VMFL T+NS N+P  LLDRME+I L 
Sbjct: 430 FRGDPASAMLEVLDPEQNGTFVDHYLEVEYDLSNVMFLTTANSYNMPGPLLDRMEIIPLA 489

Query: 488 GYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDIIRYYTREAGVRGLERQIAKV 547
           GYTEDEK  IA ++L+ KQVK +GLK++E  +   A+++IIR YTREAGVR LER+IAK+
Sbjct: 490 GYTEDEKAEIAKQHLISKQVKNHGLKRDEFSLTDEALQEIIRRYTREAGVRNLEREIAKL 549

Query: 548 CRKVVKEHTGQKQVKVKVASEQLEHLLGVRKFRYGLAEQQDQIGQVTGLAWTQVGGELLT 607
            RK V +   ++  KV+V +E LE +LGV++F+YGLAE++DQIG VTGLAWT VGG+LL+
Sbjct: 550 ARKAVTKIVRKEADKVEVTAESLEDMLGVKRFKYGLAEEEDQIGVVTGLAWTSVGGDLLS 609

Query: 608 IEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAADFHEKHDVHIHMPEGA 667
           IEA+ +PGKG++  TG LGDVM ESI AA + VRS +  +G+     +K D+H+H+PEGA
Sbjct: 610 IEALRLPGKGRMKTTGKLGDVMKESIDAAASFVRSISPQIGVKPPRFDKWDIHVHVPEGA 669

Query: 668 TPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIK 727
           TPKDGPSAGI M T++VS LTQIPV+ D+AMTGE+TLRG VL IGGLKEKLLAA RGGI 
Sbjct: 670 TPKDGPSAGIAMVTSIVSVLTQIPVKRDIAMTGEVTLRGNVLPIGGLKEKLLAALRGGIT 729

Query: 728 TVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQYAPEPL 773
           TV+IP EN +DL EIP+N+K+ L I PV  + EVL++AL   PEP+
Sbjct: 730 TVLIPAENEKDLPEIPDNVKEGLTIIPVSHVSEVLKVALVSEPEPI 775