Pairwise Alignments

Query, 798 a.a., DNA-binding, ATP-dependent protease from Pseudomonas putida KT2440

Subject, 803 a.a., DNA-binding protein from Cupriavidus basilensis FW507-4G11

 Score = 1070 bits (2768), Expect = 0.0
 Identities = 541/787 (68%), Positives = 651/787 (82%), Gaps = 9/787 (1%)

Query: 7   LPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGEKQILLLAQKNPADDDPGEDALYR 66
           LPLLPLRDVVV+PHMVIPLFVGR KSI+ALE AM   K I+L+AQK  A D+P  D LY 
Sbjct: 14  LPLLPLRDVVVFPHMVIPLFVGRPKSIKALETAMEAGKSIMLVAQKTAAKDEPTADDLYE 73

Query: 67  VGTVATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERESEVF 126
           VG +A +LQ+LKLPDGTVKVLVEG QR  +   SE E H   E   +        E+E  
Sbjct: 74  VGCIANILQMLKLPDGTVKVLVEGTQRANIREVSEDESHFMCEAVPVPPGPVETAETEAL 133

Query: 127 VRTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIVDLT 186
            R ++SQF+QYV+L KK+P E+L+SL+ IDEPGRL DT+AAH+ +K+EQKQ+ILE+V++T
Sbjct: 134 RRAIVSQFDQYVKLNKKIPPEILTSLSGIDEPGRLADTIAAHLPIKLEQKQKILEMVNVT 193

Query: 187 TRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGHNE 246
            R+E +L+ L+ EID+LQVEKRIRGRVK+QME+SQREYYLNEQ+KAIQKELG+G+EG  +
Sbjct: 194 ERLESLLSQLEGEIDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQKELGEGEEGA-D 252

Query: 247 VEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVPWKAQSKVR 306
           +EEL KRI+AA +PK+A  KA AE  KLK MSPMSAEATVVR+Y+D LV +PW+ +SKV 
Sbjct: 253 LEELDKRIKAARMPKEAKKKADAEFKKLKLMSPMSAEATVVRNYIDTLVNLPWRKKSKVN 312

Query: 307 LDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAESIA 366
            DLA AE +LD DHYGLE+VKERILEYLAVQ+RV K++ P+LCLVGPPGVGKTSL +S+A
Sbjct: 313 NDLANAERVLDEDHYGLEKVKERILEYLAVQQRVDKVKAPILCLVGPPGVGKTSLGQSVA 372

Query: 367 AATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKMGS 426
            ATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPG+++Q + KVGVRNPLFLLDEIDKMG 
Sbjct: 373 RATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLAKVGVRNPLFLLDEIDKMGM 432

Query: 427 DMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVIRL 486
           D RGDP+SALLEVLDPEQNH F DHY+EVD+DLSDVMF+ TSNS+NIPP LLDRMEVIRL
Sbjct: 433 DFRGDPSSALLEVLDPEQNHTFQDHYIEVDFDLSDVMFVATSNSLNIPPPLLDRMEVIRL 492

Query: 487 PGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDIIRYYTREAGVRGLERQIAK 546
            GYTE+EK+NIA +YL+PKQ+K NGLK  E+EV+  A+RDIIRYYTREAGVR LER+++K
Sbjct: 493 SGYTEEEKVNIAQRYLLPKQIKNNGLKPGEMEVNEDALRDIIRYYTREAGVRSLEREVSK 552

Query: 547 VCRKVVKEHTGQKQV-KVKVASEQLEHLLGVRKFRYGLAEQQDQIGQVTGLAWTQVGGEL 605
           + RKVVK    +K+   VKVASE L+  LGVRK+ +GLA +++Q+GQVTGLAWT+VGG+L
Sbjct: 553 IARKVVKLLLLKKETGTVKVASENLDKFLGVRKYDFGLAGKENQVGQVTGLAWTEVGGDL 612

Query: 606 LTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAADFHEKHDVHIHMPE 665
           LTIEA ++PGKG + +TGSLGDVM ES+ AA++VVRSRAR LGI  +  EK D+HIH+PE
Sbjct: 613 LTIEAAIMPGKGNITRTGSLGDVMKESVEAARSVVRSRARRLGITDEMFEKRDIHIHVPE 672

Query: 666 GATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGG 725
           GATPKDGPSAG  M TALVS LT IPVRADVAMTGEITLRG+VL IGGLKEKLLAAHRGG
Sbjct: 673 GATPKDGPSAGGAMTTALVSVLTGIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAHRGG 732

Query: 726 IKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQYAPEPLP-------DVAP 778
           IK V+IPEENV+DL EIP+N+K  ++I PV+WID+VL++AL+  PEPLP       DVA 
Sbjct: 733 IKLVLIPEENVKDLAEIPDNVKNAIEIVPVRWIDKVLELALERKPEPLPEEVAKPADVAD 792

Query: 779 EIVAKDE 785
           +  AK E
Sbjct: 793 KGAAKVE 799