Pairwise Alignments

Query, 442 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Pseudomonas putida KT2440

Subject, 435 a.a., ATP-dependent protease ATP-binding subunit HslU from Sinorhizobium meliloti 1021

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 49/103 (47%), Positives = 69/103 (66%), Gaps = 2/103 (1%)

Query: 82  SPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKGDEVELGKSNILLIGPTGSG 141
           SP+EI   LD+Y+IGQ+ AK+ +A+A+ N ++R    D+  DEV     NIL+IGPTG G
Sbjct: 5   SPREIVSELDRYIIGQKDAKRAVAIALRNRWRRQQLDDELRDEVM--PKNILMIGPTGVG 62

Query: 142 KTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 184
           KT ++  LA+L   PF   +AT  TE GYVG DVE I++ L++
Sbjct: 63  KTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIVRDLVE 105



 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 69/216 (31%), Positives = 98/216 (45%), Gaps = 58/216 (26%)

Query: 196 GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV 255
           GIV++DEIDKI+ +     I   VS EGVQ+ LL L+EGT  +            ++  V
Sbjct: 243 GIVFLDEIDKIATREGG--IGAGVSREGVQRDLLPLVEGTTVAT-----------KYGPV 289

Query: 256 DTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEGKKVGESLREVEPDDLVKFG 315
            T +ILFI  GAF                                      +P DL    
Sbjct: 290 KTDHILFIASGAF-----------------------------------HVAKPSDL---- 310

Query: 316 LIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEMESVDLEFRSDALKAVA 375
            +PE  GRLP+   L  L +    +ILTE + +L +QY  L E E V L+F  DA+ A+A
Sbjct: 311 -LPELQGRLPIRVELRALTKEDFRRILTETEASLIRQYKALLETEGVALDFTEDAIDALA 369

Query: 376 RKALE-----RKTGARGLRSILEGVLLDTMYEIPSK 406
             A++        GAR L++++E VL D  +  P +
Sbjct: 370 EVAVQLNANVENIGARRLQTVMERVLDDVSFNAPDR 405