Pairwise Alignments

Query, 360 a.a., putative integrative genetic element Ppu40, integrase from Pseudomonas putida KT2440

Subject, 345 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

 Score = 47.4 bits (111), Expect = 6e-10
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 7/137 (5%)

Query: 194 VAVDTGFRRAELLGLSAPDFQEGMIHLYAGQTKNGDARAIPATSRVARILHRRRMNLTTF 253
           + + TG R +E L L      E    L   +TK    R++P +  + + +     + T  
Sbjct: 207 ICLATGARISEALSLERSQISE--FKLTFVETKGKRIRSVPISENLYKEIMLASSSSTKI 264

Query: 254 EGLTVSSL-RHQWATLRAYMGMEEDPQFIVHMLRHTCASRLVQRGVPLASVQHWMGHKNI 312
              T  S  R+    L  Y+   +      H+LRHT A+  +     +  +Q  +GH+ I
Sbjct: 265 FSTTYGSAHRYIKKALPDYVPEGQ----ATHVLRHTFATHFMMNRGDILILQRILGHQKI 320

Query: 313 NTTLRYAHLAPENLMQA 329
             T+ YAH +P++L+QA
Sbjct: 321 EQTMAYAHFSPDHLIQA 337