Pairwise Alignments

Query, 360 a.a., putative integrative genetic element Ppu40, integrase from Pseudomonas putida KT2440

Subject, 310 a.a., integrase from Sinorhizobium meliloti 1021

 Score =  115 bits (289), Expect = 1e-30
 Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 4/231 (1%)

Query: 105 SDITTEAITEMVLEFEDLGNSGSTVNRKLSLLSMVLKTAVNHNWLLSVPRMIRRKEGKHR 164
           S  + E +  ++      GNS +T+NRK++ L  +L+ A     + ++P   R+KE   R
Sbjct: 79  SAFSQELLDGLIGALRKRGNSNATINRKMAALGKLLRKAYKMGDIHNLPEFKRQKEKAGR 138

Query: 165 IRWMNTEEEGNVLKACQHLGLNCLHDFIIVAVDTGFRRAELLGLSAPDFQEGMIHLYAGQ 224
           +R++  +EE  + +         L+   I  VDTG R  E + L   D  EG    +   
Sbjct: 139 LRFLEADEEEVLFREIASRSELYLY-LSIFLVDTGARLGEAIALKWNDIHEGRATFWV-- 195

Query: 225 TKNGDARAIPATSRVARILHR-RRMNLTTFEGLTVSSLRHQWATLRAYMGMEEDPQFIVH 283
           TK+G +R +P T R    L R    +   F  +     R  W   +   G+  +   + H
Sbjct: 196 TKSGRSRTVPLTVRAKDALKRVADRSPGPFSRIDQQKYRAVWNAAKVDAGLGNEDDLVPH 255

Query: 284 MLRHTCASRLVQRGVPLASVQHWMGHKNINTTLRYAHLAPENLMQARNALE 334
           +LRHTCASRLV+ G+ L  VQ W+GH+ +  T+RYAHLA  +L      LE
Sbjct: 256 ILRHTCASRLVRGGIDLRRVQMWLGHQTLEMTMRYAHLASHDLDMCVPVLE 306