Pairwise Alignments

Query, 360 a.a., putative integrative genetic element Ppu40, integrase from Pseudomonas putida KT2440

Subject, 392 a.a., putative phage integrase, catalytic core from Phaeobacter inhibens DSM 17395

 Score = 63.5 bits (153), Expect = 9e-15
 Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 39/258 (15%)

Query: 94  VLKALGADTLLSDITTEAITEMVLEFEDLGNSGSTVNRKLSLLSMVLKTAVNHNWLL--- 150
           ++ A+G+  ++ D+    I E+   F D        NR L +LS +   A    W L   
Sbjct: 129 IVPAIGSFKVV-DVERRDIAELHHRFRD---KPYQANRTLGVLSKMFNLA--EIWGLRPD 182

Query: 151 -SVP-RMIRRKEGKHRIRWMNTEEE---GNVLKACQHLGLNCLHDFIIVA----VDTGFR 201
            S P R + +     R R++N  E    G+VL   +  G      F++ A    + TG R
Sbjct: 183 GSNPCRHVPKYREIKRERYLNQNELQRLGHVLSEVEREGTET--PFVVAAFRLLILTGCR 240

Query: 202 RAEL----------LGLSAPDFQEGMIHLYAGQTKNGDARAIPATSRVARILHRRRMNLT 251
             E+           G+  PD + G   +   Q        +P T     ++  +     
Sbjct: 241 LGEIQTLKWDYITDTGMELPDTKTGARRIPLPQPARDVLTHLPRTPGNPYVIEGK----- 295

Query: 252 TFEGLTVSSLRHQWATLRAYMGMEEDPQFIVHMLRHTCASRLVQRGVPLASVQHWMGHKN 311
              G   + L+H W  +RA  G+       +H LRHT AS  V  G+P+  V   +GH  
Sbjct: 296 -LAGQYATDLQHPWRRIRARAGLAG---VRIHDLRHTYASNAVSSGMPIQMVGRLLGHSQ 351

Query: 312 INTTLRYAHLAPENLMQA 329
           I TT+RYAHLA + + QA
Sbjct: 352 IQTTMRYAHLADDPVRQA 369