Pairwise Alignments

Query, 250 a.a., putative phage exonuclease from Pseudomonas putida KT2440

Subject, 283 a.a., flap endonuclease Xni from Vibrio cholerae E7946 ATCC 55056

 Score = 53.5 bits (127), Expect = 4e-12
 Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 23/205 (11%)

Query: 48  TFTGMVQNLIDKTGADEALLVFSDKVN---WRKTVLPTYKHNRSK---TVQPLLRSHLTA 101
           T T  +Q +I++      + VF   ++   WR  +LPTYK NR      +Q  + +   A
Sbjct: 57  TTTRTLQRIINEAQPSHMIAVFDHHLSDRGWRAELLPTYKANRKPMPDVLQQGIDAIQDA 116

Query: 102 WAQETFPSISKPTLEGDDVCGILLTRARKFGEEIVVASIDKDF-----KTVPGHHY---- 152
           W Q    S+     E DD+   L  +     E++ + S DK +      T+    Y    
Sbjct: 117 WWQLGIDSLLSEGDEADDLVATLACKVAAHQEKVTIISTDKGYCQLLSPTLQIRDYFQQR 176

Query: 153 ----NFNTDTFFEVTEEEADYWHLYQTLMGDTTDGYSGCPGIGPVAAKRLLDKSPTWETV 208
                F    F     +  DYW L     G ++    G  GIGP AAK +L++  + E  
Sbjct: 177 WLDEPFIAQEFGVTPAQLTDYWGL----TGVSSSQIPGVAGIGPKAAKEILNQFSSIEEA 232

Query: 209 VAAFEKAGLCEEEALVQARVARILR 233
            A+ E      ++      +ARI +
Sbjct: 233 YASPELPAKYRKKLDPHIEMARICK 257