Pairwise Alignments

Query, 250 a.a., putative phage exonuclease from Pseudomonas putida KT2440

Subject, 236 a.a., exodeoxyribonuclease IX (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 56.6 bits (135), Expect = 4e-13
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)

Query: 71  DKVNWRKTVLPTYKHNRSKTVQPLLRSHLTAWAQETFPSISKPTL----EGDDVCGILLT 126
           D+++WRK + P YK  R    +PL    +    QE   ++   ++    E DDV   L T
Sbjct: 31  DEISWRKQLYPDYKKGRKPMPEPLAAGLIAL--QEHLQNLQIQSIYAAAEADDVIATLAT 88

Query: 127 RARKFGEEIVVASIDKDFKTV------PGHHYNFNTDTFFEVTEE---EADYWHLYQTLM 177
           +  K   E ++ S DK F  +         H+N       E+ ++   +   +     L 
Sbjct: 89  KTAKAQGEALIVSTDKGFSQLNHPRISQWDHFNQQYLNIAELEQKLGVDRSQFLDLMALA 148

Query: 178 GDTTDGYSGCPGIGPVAAKRLLDKSPTWETVVAAFEKAGLCEEEALVQAR 227
           GD+ +   G PGIGP +A  LL    T  T+ ++    G  + + L + R
Sbjct: 149 GDSGNKIPGIPGIGPKSAAELLRTFRTLATLFSSLPNLGAKQAKKLAEGR 198