Pairwise Alignments

Query, 266 a.a., Sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 281 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  130 bits (326), Expect = 4e-35
 Identities = 75/253 (29%), Positives = 122/253 (48%), Gaps = 4/253 (1%)

Query: 17  LVPIYWLLNMSFKSNAEILGGLTLWPQAFTLDNYRVIFTDASWYSGYINSLYYVCLNTLI 76
           L P Y+ +  S +S A +   + L P      NY     D        NS     L   +
Sbjct: 28  LFPFYYAIITSLRSGANLFTVIWL-PDEMNWGNYVTALMDNGIARSLFNSAVVATLTVGL 86

Query: 77  SLLVALPAAYAFSRYRFLGDRHLFFWLLTNRMAPPAVFLLPFFQLYSSIGLFDTHIAVAL 136
            LLV++ AA+A SR RF G ++L F +L   M P    L   F+L   +GL+D+  A+ L
Sbjct: 87  CLLVSITAAFALSRIRFTGRKYLLFTILCVSMFPQVAVLSGMFELVRFMGLYDSLGALVL 146

Query: 137 AHCLFNVPLAVWILEGFMSGVPREIDETAYIDGYSFPRFFVKIFIPLIGSGIGVTAFFCF 196
           ++  F++P  +W+L  FM  +P E++E A +DG S      +IF+P++G  +  T    F
Sbjct: 147 SYTTFSLPFTIWVLTTFMKAIPVELEEAAIVDGASTWTIISRIFVPIMGPSLVTTGLLAF 206

Query: 197 MFSWVELLLARTLTSVNAK---PIAAVMTRTVSASGIDWGVLAAAGVLTILPGMLVIWFV 253
           + +W E + A T      K   P+A  M +  S   + WG + A+ V+  LP ++++   
Sbjct: 207 IGAWNEFMFALTFVISGDKRTVPVAISMLQGSSQFELPWGAIMASSVIVTLPIVVLVLIF 266

Query: 254 RNHVAKGFALGRV 266
           +  +  G   G V
Sbjct: 267 QRRIVSGLTNGAV 279