Pairwise Alignments

Query, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 328 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) from Sinorhizobium meliloti 1021

 Score =  108 bits (271), Expect = 1e-28
 Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 30/292 (10%)

Query: 10  AWWLVLPVFLLVAFSAVVPMMTVVNYSVQD--IFDQSSRYFVG----ADW---------Y 54
           AW  + P FL++A  A  P++  + +S  +  + + S   FVG      W         Y
Sbjct: 31  AWLFLAPTFLVLALVAGWPLIRTIYFSFTNASLTNLSGAEFVGFANYLSWITLKSGRTIY 90

Query: 55  RQVLRDPALHDALLRQFIYSACVLLIEIPLGIGIALAM----PTKGRMASVCLIVMAIPL 110
           R +L DPA  +A+     ++   + IE  LG+ +AL +    P +G + +  LI  AIP 
Sbjct: 91  RGLLADPAWWNAVWNTLKFTVLSVSIETALGLIVALVLNAQFPGRGLVRAAILIPWAIPT 150

Query: 111 LIPWNVVGTIWQIFGRADIGLLGASLAKLGV---SYNYAGDPFDAWLTVLVMDVWHWTSL 167
           ++       +W        G+L   L  LG+      +   P  A +  L++DVW  T  
Sbjct: 151 IVS----AKMWAWMLNDQFGILNDMLIGLGLIGEKIAWTASPDTAMIAELIVDVWKTTPF 206

Query: 168 VALLCYSGLRAIPDVYYQAARIDRASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTE 227
           +ALL  +GL+ +P   Y+AA+ID      VF  + LP ++  L++A++ R +D+  I+  
Sbjct: 207 MALLILAGLQMVPGDIYEAAKIDGVHPVRVFWRVTLPLIRPALMVAVIFRMLDALRIFDL 266

Query: 228 PFVLTGGGPGNATTFLSQTLTRMAVGQFD-LGPAAAFSLVYFLIILLVSWLF 278
            +VLT   P NA T     + R  +  FD     AA S + FLII  ++ L+
Sbjct: 267 IYVLT---PNNAQTKTMSVMARENLFDFDKFAYGAAASTMLFLIIATITILY 315