Pairwise Alignments

Query, 288 a.a., sugar ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 288 a.a., ABC transporter for Xylitol, permease component 1 (from data) from Dinoroseobacter shibae DFL-12

 Score =  139 bits (350), Expect = 7e-38
 Identities = 82/282 (29%), Positives = 147/282 (52%), Gaps = 6/282 (2%)

Query: 1   MNNKVSNNKAWWLVLPVFLLVAFSAVVPMMTVVNYSVQ--DIFDQSSRYFVGADWYRQVL 58
           M+ +V     +  + P  + +A   + P++  +  S+   ++       F+G + Y  VL
Sbjct: 1   MSGQVPRKTVFAFIGPAVIGLALVGIAPLLYALWTSLHFYNLTKLRRVEFIGLENYWTVL 60

Query: 59  RDPALHDALLRQFIYSACVLLIEIPLGIGIALAMPTKGR--MASVCLIVMAIPLLIPWNV 116
            D     A+ R F      L ++I LG+GIAL +   G   + ++  + + +P+   + V
Sbjct: 61  TDEVFWQAMGRTFFLLGTALPLQIALGLGIALVLHQPGLTLVKTLARLSLVLPMATTYAV 120

Query: 117 VGTIWQIFGRADIGLLGASLAKLGVSYNYAGDPFDAWLTVLVMDVWHWTSLVALLCYSGL 176
           VG + Q+      G++   L   G   N+ GDP +A+  ++  DVW WT  VAL+  +GL
Sbjct: 121 VGLLGQVMFNQKFGVVNQLLG--GADINWIGDPENAFAMIIFWDVWQWTPFVALVLLAGL 178

Query: 177 RAIPDVYYQAARIDRASGWAVFRHIQLPKLKNVLVIALMLRFMDSFMIYTEPFVLTGGGP 236
             +P    +AAR++  S W V R++QLP L   LV  L+LR  D+  ++   F LT GGP
Sbjct: 179 TMVPGEVEEAARLETKSKWTVLRYVQLPFLLPGLVAVLILRTADTLKLFDMVFTLTRGGP 238

Query: 237 GNATTFLSQTLTRMAVGQFDLGPAAAFSLVYFLIILLVSWLF 278
           G++T F+S  + R+    FD G A+A +++  +I ++++ ++
Sbjct: 239 GSSTEFISLMIQRVGFRGFDQGLASAQAIILLIITIVLAQIY 280