Pairwise Alignments

Query, 365 a.a., Sugar ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 393 a.a., sn-glycerol-3-phosphate import ATP-binding protein UgpC from Vibrio cholerae E7946 ATCC 55056

 Score =  204 bits (519), Expect = 3e-57
 Identities = 124/352 (35%), Positives = 199/352 (56%), Gaps = 25/352 (7%)

Query: 6   LRQLAHSYSR--QPASEADYALHALEHVWEQGGAYALLGPSGCGKSTLLNIISGLLTPSH 63
           ++QL  +Y    Q     D ++H       QG    L+GPSGCGKS++L  I+GL + + 
Sbjct: 25  IKQLVKTYDNGHQAVKGVDLSIH-------QGEFIVLVGPSGCGKSSILRSIAGLESITS 77

Query: 64  GEVLFDGKPVNQLSPQARNIAQVFQFPVVYDTMTVFDNLAFPLRNQGLDEARVRARVEEI 123
           GE+   G+ V+   P  R+IA VFQ   +Y  M+V+DNLA+ L+N+G+D+  + A++ ++
Sbjct: 78  GEIHLAGRRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKV 137

Query: 124 AEVLELTAVLRKKARNLTADEKQKVSMGRGLVRDDVSAILFDEPLTVIDPHLKWKLRRKL 183
           A+ L++   L +K   L+  ++Q+V+MGR +VRD     LFDEPL+ +D  L+  +R ++
Sbjct: 138 AKTLKIEEYLDRKPAKLSGGQRQRVAMGRAIVRDP-QLFLFDEPLSNLDAALRAHMRLEI 196

Query: 184 KQIHEQFNITMIYVTHDQLEASTFADKIAVMHGGRIVQFGTPRELFERPRHTFVGYFIGS 243
           K++  +  +T +YVTHDQ+EA T AD+I V+  G I Q GTP E++ +P  TFV  FIGS
Sbjct: 197 KKLQRELGVTSVYVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGS 256

Query: 244 PGMNLIDVRAEAGAVVFGDVQLVLPDGLCERLASLAGGRLQVGIRPEFVQLWDSPFEGAY 303
           P MN +    + G +        LP     +  +++   + +GIRPE   L   P   A 
Sbjct: 257 PAMNFLPASIKQGQLHIAGKHCYLP-----QFDAMSSENITLGIRPEHASL--HPLTNAI 309

Query: 304 PAR--VLDVEDLGTYRIVTLELGGVALK---ARLGEDRPLPVDQT---WVSL 347
             +  +  VE LG  ++V  ++ G+  +     +  + PL V QT   WV+L
Sbjct: 310 ELKLDIQVVEPLGPNQLVHGKIIGLESEQDFIAVTAEIPLDVHQTLPIWVAL 361