Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  325 bits (834), Expect = 5e-93
 Identities = 193/541 (35%), Positives = 297/541 (54%), Gaps = 17/541 (3%)

Query: 18   TDLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWRALVAGRVWKGEI 77
            TD  G I   N+ F  +SGY+  ++L     +L     +      + + L     W+GE+
Sbjct: 714  TDPAGYIVQANEAFSRVSGYAVSQVLDQLPNMLTVDEQQEAHLRYVLKQLQQHSTWEGEV 773

Query: 78   CNRSKDGSLY--WVDSTMVPLVDPLTGQVRKYVSIRFDVTEKR---QLLHTLQWRVGHDV 132
              + ++G  Y  WV  T V L D   G +  YV    D++E++   Q +H L +   +D 
Sbjct: 774  WLKRRNGEHYPAWVGITAV-LDDE--GDLASYVCFFSDISERKASEQRIHRLAY---YDA 827

Query: 133  LTGLPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVEVAQR 192
            LT LPNR    D L+ AL  +  +   + +  LDLD FK +ND  GHA GD +L E+A R
Sbjct: 828  LTHLPNRTLFQDRLHTALQSADRQKTWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMATR 887

Query: 193  LKSILRGGDAVARLSGDEFVLILRD-VDDEHQLHAAL---QRVLRALAAPCVVREHTLSL 248
            L   +   D VAR+ GDEF L+L+     E  L+ A+   +++L +L  P V+      +
Sbjct: 888  LLGCVADDDTVARMGGDEFTLLLQPRASREMALNRAINVAEQILASLVRPFVLEGREFFV 947

Query: 249  SASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARVR 308
            +ASIG+ L PQD  +   L+++AD AMY AK+RG+N +  +            +  + +R
Sbjct: 948  TASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLELESDLR 1007

Query: 309  RALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIGE 368
             AL   E  LYYQP+ +    ++ G E LLRW+ P RG+VPPGDF+P +E+  L+V++G+
Sbjct: 1008 HALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGD 1067

Query: 369  WVIGQALSQLQAW-QRQGQPWSLSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLEI 427
            WVI +A  QL+ W Q + +   +SVNI+AR         R+  +L +   + PA L+LE+
Sbjct: 1068 WVITEACRQLRTWHQAKVRVPKVSVNISARQFSDGQLGTRIANILRS-TGLPPACLELEL 1126

Query: 428  VESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDIL 487
             ES+ +  +    + L   + LG+  ++DDFGTGYSSL+YLK+ P   +KID++FV  + 
Sbjct: 1127 TESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLP 1186

Query: 488  HDQDDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMPASDVQ 547
              + D  +  A+I +A +    VIAEG+E+ E    L   GC+  QGY   RPMPA+  +
Sbjct: 1187 SGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPANRFE 1246

Query: 548  A 548
            A
Sbjct: 1247 A 1247



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 156 EGISLAVCMLDLDGFKAVNDGYGHAVGDLL 185
           EG  +A+C+LDL G KA  +  G   GD L
Sbjct: 278 EGTGVALCVLDLSGLKAFFERAGLHTGDQL 307