Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 1238 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  362 bits (930), Expect = e-104
 Identities = 203/534 (38%), Positives = 309/534 (57%), Gaps = 3/534 (0%)

Query: 24   ITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWRALVAGRVWKGEICNRSKD 83
            I YVN  F  I+G+S  E++G N R L     +      M RAL  G   +  + +  KD
Sbjct: 705  IIYVNPAFEKITGFSAAEVIGRNFRFLQGLETQQAELEEMRRALEEGTYCEVTLRSYRKD 764

Query: 84   GSLYWVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLLHTLQWRVGHDVLTGLPNRAYLS 143
            GSL+W   ++ P+ D   G +   V+ + DV+E +     L  +  HD LTGLPNR    
Sbjct: 765  GSLFWNQISLAPVRDQ-KGHLTHMVASQTDVSESKAFEEMLLQQATHDALTGLPNRLLFL 823

Query: 144  DLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVEVAQRLKSILRGGDAV 203
            D L+QA A +R  G  +AV  +DLD FKA+NDG+ H+ GD +L   A RL+  ++  + V
Sbjct: 824  DRLDQAAARARGGGSPIAVLFIDLDNFKAINDGFSHSEGDAVLQIAAGRLQQCIQEHETV 883

Query: 204  ARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVREHTLSLSASIGVTLYPQDDED 263
            ARLS DEFV++L D+D + +       +   +A P  V  + + L+ASIGV  +P D + 
Sbjct: 884  ARLSSDEFVILLIDLDVQSKARVKAAMIQSLMAKPFEVMGNPIELTASIGVATFPHDGQS 943

Query: 264  ADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARVRRALRNGELCLYYQPK 323
               L++ AD A+  AKQ+G+N +  F  +  ++L++       +R+AL +  L LY+QP+
Sbjct: 944  GSELLQAADLAVCAAKQQGKNLWCSFSEAMREQLRSRIDIEKDLRQALIDNSLELYFQPQ 1003

Query: 324  VNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIGEWVIGQALSQLQAW-Q 382
            V+L T ++LGFE L+RW  P RG+V PG+F+P  E++DLI  IG WV+  A   L+ W  
Sbjct: 1004 VDLVTHRLLGFETLVRWNHPERGLVAPGEFIPIAEESDLIDAIGLWVMRAAGLTLRRWID 1063

Query: 383  RQGQPWSLSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLEIVESVAIDNLQHVSRC 442
             +G   SLS NI+AR   R +   +L  +L  +  + P  L++E+ ES  I++ +   + 
Sbjct: 1064 HEGFTGSLSFNISARQFIRQNIFLKLFDVLQEF-QIPPHQLEIELTESSLIESPERFVQW 1122

Query: 443  LDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDILHDQDDLALTEAVIGL 502
            L   R++G + +LDDFGTGYSSL YLKRLP   +KID+SF+RD+ HD DD A+ +A++ +
Sbjct: 1123 LQEARSMGFQVALDDFGTGYSSLGYLKRLPINALKIDRSFIRDLPHDHDDQAIVQAIVAM 1182

Query: 503  ARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMPASDVQAWAQAYQQP 556
            A+      IAEG+E +E    L  +GC+  QG+    P+P ++  A+      P
Sbjct: 1183 AKVLKLRTIAEGVERLEQAAFLEAIGCDAVQGFFYGPPLPEAEALAFLHRSASP 1236