Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  348 bits (893), Expect = e-100
 Identities = 210/541 (38%), Positives = 305/541 (56%), Gaps = 19/541 (3%)

Query: 19  DLRGNITYVNQQFCSISGYSREELLGAN-HRILN----SGLHEPTFFVGMWRALVAGRVW 73
           D+ G I ++N    ++ GY+ EELLG + HR+L+     G H       M   L +G   
Sbjct: 194 DVEGRINFINPAATALLGYTEEELLGQDSHRMLHHSHIDGSHYAVEDCPMHLCLHSG--- 250

Query: 74  KGEICNRSKDGSLYWVDSTMVPLVDPLT-----GQVRKYVSIRFDVTEKRQLLHTLQWRV 128
              I  R ++ +L+  D T +PL    T     G++   V+   D+ ++++ L  L+   
Sbjct: 251 ---ITIRDRESTLWHRDGTPLPLECSHTPIVEDGRIIGAVTTLRDIRDRKRYLEQLERHS 307

Query: 129 GHDVLTGLPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVE 188
            +D LT LPNR  L D LN  +   R  G+++AV  L+LD FK++ND  G A GD +L E
Sbjct: 308 NYDELTDLPNRNLLYDRLNHNIEVCRRSGMNIAVLTLNLDRFKSINDTLGRAAGDQVLRE 367

Query: 189 VAQRLKSILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVREHTLSL 248
           VAQRL   +R  D +ARL GDEFVL++ +V    Q  A  Q +L+ALA P  V E    L
Sbjct: 368 VAQRLGRQVRKMDTLARLEGDEFVLVV-EVATAEQSSAFAQPILKALANPFHVAEREFFL 426

Query: 249 SASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARVR 308
           S SIG+  +P+D ++ + L+R+AD AMY AK +G NR+  +     Q           +R
Sbjct: 427 SGSIGIATFPKDGDNGEELLRNADAAMYKAKTKGGNRFQFYTAEMNQRSLERLDLENGLR 486

Query: 309 RALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIGE 368
           RA+  GEL +YYQP+VNLR G ++G E L+RWQ P +G+V PG F+   E+T LIV +GE
Sbjct: 487 RAIDQGELVVYYQPQVNLRNGAIIGAEALVRWQDPEKGLVMPGSFIALAEETGLIVPLGE 546

Query: 369 WVIGQALSQLQAWQRQGQPW-SLSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLEI 427
           WV+  A SQ +AWQ  G P   ++VN++AR     D  E   ++L     + P  L+LE+
Sbjct: 547 WVLRTACSQNKAWQDAGLPKIPVAVNLSARQFAAQDVVELAARILHD-TGLAPNYLELEL 605

Query: 428 VESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDIL 487
            ES  + + +   R  +  + L +  S+DDFGTG+SSLSYLKR     +KIDQ+FVRDI 
Sbjct: 606 TESAVMADAEAFIRATEKLKGLSIALSIDDFGTGFSSLSYLKRFAIDRLKIDQTFVRDIT 665

Query: 488 HDQDDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMPASDVQ 547
           HD D  ++  A+I LA +     IAEG+E+      L    C+  QGY  +  +PA + +
Sbjct: 666 HDPDSASIALAIISLAHSLKLLAIAEGVETEAQLNFLRARNCDEMQGYFFSPALPADEFE 725

Query: 548 A 548
           A
Sbjct: 726 A 726