Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 640 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  340 bits (872), Expect = 1e-97
 Identities = 204/567 (35%), Positives = 301/567 (53%), Gaps = 27/567 (4%)

Query: 1   MDDNYRAAVDAAAIFSET-----------DLRGNITYVNQQFCSISGYSREELLGANHRI 49
           +  +YRA  ++ A++              D    IT+ N+      G  RE +LG + R 
Sbjct: 77  LQGSYRALAESEALYESLVQVMPQCLYRMDRESRITFANRALERHLGKPREAILGHSPRE 136

Query: 50  LNSGLHEPTFFVGMWRALVAGRVWKGEICNR-------SKDGSLYWVDSTMVPLVDPLTG 102
           +      P      +R     RV +GE  N          +    +++    P   P  G
Sbjct: 137 VY-----PADLAAKYRQDDL-RVLQGETLNLIEEMVSLDSEQRKRYIEIVKTPTYAP-DG 189

Query: 103 QVRKYVSIRFDVTEKRQLLHTLQWRVGHDVLTGLPNRAYLSDLLNQALAYSRCEGISLAV 162
            +     I +D+T ++     +++   HD LT LPNR  L D   QA   +      +A+
Sbjct: 190 SINGIQGIFWDITARKSAEEQIEYLAHHDPLTDLPNRVLLRDRFLQAQGQAARSANRVAI 249

Query: 163 CMLDLDGFKAVNDGYGHAVGDLLLVEVAQRLKSILRGGDAVARLSGDEFVLILRDVDDEH 222
             LDLD FK VND  GH +GD LL  VA+RL+  +R  D ++R  GDEFV++L ++ D  
Sbjct: 250 LFLDLDHFKLVNDTLGHPIGDRLLQAVAERLRRGVRETDTISRQGGDEFVIVLPELADPE 309

Query: 223 QLHAALQRVLRALAAPCVVREHTLSLSASIGVTLYPQDDEDADTLVRHADQAMYVAKQRG 282
              +   +++  +  P  V  H L+++ S+G+ LYP D ED DTL++ AD AMY AK+ G
Sbjct: 310 SAGSIAGKLMEQMHEPVRVNGHRLNVTFSLGIALYPDDGEDFDTLMKKADTAMYSAKEAG 369

Query: 283 RNRYHLFDVSQEQELKATHQTVARVRRALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQR 342
           RN    F  +   E  A  +   R++RAL   EL LYYQP+ +L +G++LG E LLRW+ 
Sbjct: 370 RNTLRFFTAAMNVEAAARLKLQNRLQRALEKEELVLYYQPQFDLASGRILGTEALLRWRD 429

Query: 343 PGRGVVPPGDFLPWVEQTDLIVEIGEWVIGQALSQLQAWQRQG-QPWSLSVNIAARHLQR 401
           P RG+VPPG+F+P  E T LI  IGEWVIG+A  +L+ W   G    +++VN++    +R
Sbjct: 430 PERGLVPPGEFIPVAEDTGLIGPIGEWVIGEACRELRRWHEAGATDLTMAVNLSPVQFRR 489

Query: 402 SDFAERLQQLLAAYPAVDPALLDLEIVESVAIDNLQHVSRCLDACRALGVRFSLDDFGTG 461
           S   E   + L     +    L+ E+ ES+ I     +   L A + LGV+ S+DDFGTG
Sbjct: 490 SRLVEIAARALQE-NRLPAECLEFELTESLLIREDAAILETLTALKGLGVKLSIDDFGTG 548

Query: 462 YSSLSYLKRLPTQTIKIDQSFVRDILHDQDDLALTEAVIGLARAFGREVIAEGLESVEHG 521
           YSSL+YLKR     +KIDQSF+R++  + DD A+  AVI +AR      +AEG+E+ E  
Sbjct: 549 YSSLAYLKRFNVDKLKIDQSFIRELCSNPDDEAIVSAVITMARQLRLRTVAEGVENAEQA 608

Query: 522 RVLMGLGCELAQGYCIARPMPASDVQA 548
            +L    C+  QG+   RPMPA+D QA
Sbjct: 609 TMLRRFDCDEVQGFLFGRPMPAADFQA 635