Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  410 bits (1055), Expect = e-119
 Identities = 214/543 (39%), Positives = 319/543 (58%), Gaps = 11/543 (2%)

Query: 18  TDLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWRALVAGRVWKGEI 77
           TD    I  VN+ F +++GY+ EE+ G   R L SG H+  F+V +WR+L     W+GEI
Sbjct: 422 TDAENRILLVNRAFVAVTGYTLEEVRGRTPRFLQSGRHDEAFYVNLWRSLRETGHWQGEI 481

Query: 78  CNRSKDGSLY--WVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLLHTLQWRVGHDVLTG 135
            +R+KDG ++  W     +  V    G V  Y++I  D+TE +     +Q+   HD LTG
Sbjct: 482 WDRAKDGRIHPQWA---AISAVADAAGTVSNYIAIYSDLTEHKAAQDRIQFLAQHDPLTG 538

Query: 136 LPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVEVAQRLKS 195
           LPNR  L D L  A+A +  EG  + V  +DLD FK +ND  GH+VGD L+  V +RL+ 
Sbjct: 539 LPNRMLLQDRLTVAIAAAAREGHEVGVLFIDLDRFKTINDSLGHSVGDELIKGVTKRLQD 598

Query: 196 ILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVREHTLSLSASIGVT 255
            +R  D V+RL GDEF+++L  +            VL  L AP  +    L ++ASIG++
Sbjct: 599 AVRESDTVSRLGGDEFIVVLHRIRRSEDAAHVADAVLAQLTAPFNIAGKELRVTASIGIS 658

Query: 256 LYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARVRRALRNGE 315
           ++P D ED + L+++AD AM+ AK+RGRN Y  F                 +R A++  E
Sbjct: 659 VFPADGEDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNARAGERLALENSLRGAVQRKE 718

Query: 316 LCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIGEWVIGQAL 375
             L+YQP+V +R+G+++G E L+RW+R   G V P DF+P  E+T  I+EIG+WV+ +A 
Sbjct: 719 FVLFYQPQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIPLAEETGTILEIGDWVLAEAC 778

Query: 376 SQLQAWQRQG-----QPWSLSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLEIVES 430
            Q   W +Q      +P  ++VN+++   ++  F E L  ++  YP +    ++LE+ ES
Sbjct: 779 RQQVQWDQQWPAMGLKPVPVAVNLSSLQFRQKHFKENLLDIVGDYP-LPAGRIELELTES 837

Query: 431 VAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDILHDQ 490
           + ++  + V   L   +  G+R S+DDFGTGYSSLSYLKR P   +KID SFVRDI++D 
Sbjct: 838 IVMEEPEQVGAVLAELKQAGLRLSIDDFGTGYSSLSYLKRFPLDKLKIDASFVRDIVNDS 897

Query: 491 DDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMPASDVQAWA 550
            DLA+  AV+ L  + G +V+AEG+E      +L  +GC++AQGY   RP+PA + QAW 
Sbjct: 898 ADLAIVHAVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDIAQGYHFCRPVPAEEFQAWV 957

Query: 551 QAY 553
            AY
Sbjct: 958 AAY 960