Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 651 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  402 bits (1034), Expect = e-116
 Identities = 225/554 (40%), Positives = 325/554 (58%), Gaps = 16/554 (2%)

Query: 11  AAAIFSE-------TDLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGM 63
           A+A+FS        TDL G +  VN  FC I+GY   EL G N R+L SG  +  F+  +
Sbjct: 92  ASAVFSAAREGIVVTDLEGRVEAVNPAFCQITGYGEAELQGFNLRLLKSGRQDGAFYRQL 151

Query: 64  WRALVAGRVWKGEICNRSKDGSLY--WVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLL 121
           WR L+    W+GEI NR K+G  Y  W+    +  V     Q   YV +  D++  R+  
Sbjct: 152 WRDLLESGHWQGEIWNRRKNGETYPQWLT---ISTVRDEAHQPVSYVGVFLDLSPIRRSE 208

Query: 122 HTLQWRVGHDVLTGLPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAV 181
             L     HD LT LPNR      L  AL+ S  EG S AV  LDLD FK VND  GH  
Sbjct: 209 QKLLHLAHHDPLTDLPNRTLFLARLEHALSLSAREGGSGAVLFLDLDRFKDVNDSLGHPT 268

Query: 182 GDLLLVEVAQRLKSILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVV 241
           GD LL  VA+RL+  LR  D +ARL GDEF+L+L       +     +++L  LAAP  +
Sbjct: 269 GDRLLCAVAERLRPCLRESDTLARLGGDEFLLLLETAATPERAAVVAEKLLEQLAAPFRL 328

Query: 242 REHT-LSLSASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKAT 300
            + + + + ASIG+ LYP D ++A TL++HAD A+Y AK  GR+ +  +  +Q ++  A 
Sbjct: 329 DDRSEVYVGASIGICLYPADGDNATTLIQHADSALYQAKAAGRHTFRFYSEAQTRQADAR 388

Query: 301 HQTVARVRRALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQT 360
               A +RR L   E  LYYQP+V+LRT  + G E L+RW+ PG  +VPP  F+P  E+T
Sbjct: 389 LALEAALRRGLEKEEFLLYYQPQVDLRTASLEGVEALVRWRLPGGELVPPARFIPLAEET 448

Query: 361 DLIVEIGEWVIGQALSQLQAWQRQGQP-WSLSVNIAARHLQRSDFAERLQQLLAAYPAVD 419
            LI+ +GEWV+ QA  Q+Q W  +G P   ++VN+++R  +++D  +R+  +LA    + 
Sbjct: 449 GLILPLGEWVLRQACRQMQQWVARGLPIRRVAVNLSSRQFRQADLLQRINAILAE-TGLA 507

Query: 420 PALLDLEIVESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKID 479
           P  L+LEI ES+ +DN   V   L+A  A+G+R ++DDFGTGYSSLSYLKR P  T+K+D
Sbjct: 508 PRYLELEITESLLMDNSAQVDAKLEALEAMGIRLAIDDFGTGYSSLSYLKRFPLHTLKLD 567

Query: 480 QSFVRDILHDQDDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIAR 539
           +SF+RDI  D     +  ++I L +    +++AEG+E+ +   +L+  GC   QGY  + 
Sbjct: 568 RSFIRDIADDPVSSNIVASIIELGQHLDMDILAEGVETDQQRGILLQNGCRTCQGYLFSH 627

Query: 540 PMPASDVQA-WAQA 552
           P+PA +++A W +A
Sbjct: 628 PLPAEELEARWLRA 641