Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  405 bits (1041), Expect = e-117
 Identities = 229/542 (42%), Positives = 321/542 (59%), Gaps = 12/542 (2%)

Query: 15  FSETDLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWRALVAGRVWK 74
           F  TD   NI  VN+ FC  +GYS EE+LG N R+L+SG H+ TF+  MW AL +   W+
Sbjct: 412 FLVTDADNNIRSVNRAFCETTGYSAEEVLGRNPRLLSSGHHDKTFYRQMWEALNSQGYWQ 471

Query: 75  GEICNRSKDGSLY--WVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLLHTLQWRVGHDV 132
           GEI +R K G +Y  W   T + +V    G+V  +V++  D+++++ L   LQ+   HD 
Sbjct: 472 GEIYDRRKSGEIYPKW---TRINVVKDDQGRVVNHVAVFSDISDRKALEERLQFLAQHDH 528

Query: 133 LTGLPNRAYLSDLLNQALAYSRCEGIS----LAVCMLDLDGFKAVNDGYGHAVGDLLLVE 188
           LTGLPNR  L   L QA+  +   G      +A+ +LDLD FK +ND  GH  GD LL  
Sbjct: 529 LTGLPNRNLLRLRLEQAVESAMERGAGGINPVALLLLDLDHFKTINDSLGHHAGDQLLRT 588

Query: 189 VAQRLKSILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVREHTLSL 248
           V +RLK+ILR    + R  GDEF+++L    D  ++  A + VL ALA P  V  H LS+
Sbjct: 589 VVKRLKNILRESSTLCRQGGDEFLIVLPQAQDLARVSRAAETVLAALATPFEVDGHPLSI 648

Query: 249 SASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARVR 308
           + SIG++L P D  D DTL++ AD A+  AKQ GRN Y  F  +             R+ 
Sbjct: 649 TGSIGISLAPDDGSDFDTLLKKADTALVHAKQSGRNAYRFFTEAMNVSTLERLTLQQRLH 708

Query: 309 RALRNGELCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIGE 368
           +AL   EL LYYQP+++L +G+V+G E LLRW+ P  G+VPPG F+P  E+T LIV +G 
Sbjct: 709 QALERQELVLYYQPQLDLASGRVVGVEALLRWRTP-EGLVPPGKFIPLAEETGLIVPMGA 767

Query: 369 WVIGQALSQLQAWQRQG-QPWSLSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLEI 427
           WVI +A  Q + W   G  P +++VN++A    R +    +   L+A  ++  A L+LE+
Sbjct: 768 WVIQEACRQARTWLDAGLPPMTMAVNLSALQFHRDNLLITVGDALSA-ASLPAASLELEL 826

Query: 428 VESVAIDNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDIL 487
            ES+ I + +     L A  A+GV  S+DDFGTGYSSL+YLKR     +KIDQSFVRDI 
Sbjct: 827 TESILIQDAEATLATLKAMNAMGVLLSIDDFGTGYSSLAYLKRFTVDKLKIDQSFVRDIT 886

Query: 488 HDQDDLALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMPASDVQ 547
            D D  A+  AV+ +A +   + IAEG+E+      L   GC+  QGY  ARPMPA++ +
Sbjct: 887 SDGDSAAIVRAVVQMASSLKLKTIAEGVETESQAAALRATGCDEVQGYLYARPMPAAECE 946

Query: 548 AW 549
           A+
Sbjct: 947 AY 948