Pairwise Alignments

Query, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  395 bits (1014), Expect = e-114
 Identities = 222/533 (41%), Positives = 302/533 (56%), Gaps = 8/533 (1%)

Query: 18  TDLRGNITYVNQQFCSISGYSREELLG-ANHRILNSGLHEPTFFVGMWRALVAGRVWKGE 76
           TD RG I  VN  F  ++GYS  +  G A   IL SG H+P F+  MW++L     W+GE
Sbjct: 428 TDARGRIQSVNPAFSEVTGYSEADARGRAPGHILASGQHDPAFYAQMWQSLQEQGKWQGE 487

Query: 77  ICNRSKDGSLY--WVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLLHTLQWRVGHDVLT 134
           + NR K G  Y  W+  T +       GQV +YV +  D+T+++Q    +     HD LT
Sbjct: 488 VINRRKSGETYPEWLSITAIK---DGAGQVSQYVGLFTDITDRKQAEAHIHHLAYHDPLT 544

Query: 135 GLPNRAYLSDLLNQALAYSRCEGISLAVCMLDLDGFKAVNDGYGHAVGDLLLVEVAQRLK 194
           GLPNR    D L  AL  +      LAV +LDLD FKAVND  GH  GDLLL EV  RL 
Sbjct: 545 GLPNRRLFYDRLENALRQAHRSRRKLAVLLLDLDRFKAVNDTLGHDQGDLLLKEVGARLS 604

Query: 195 SILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVREHTLSLSASIGV 254
             LR GD +ARL GDEFVL+L +V           ++L     P  + E  +  S SIG+
Sbjct: 605 LCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLAQFDQPVRLGEREIFASTSIGI 664

Query: 255 TLYPQDDEDADTLVRHADQAMYVAKQRGRNRYHLFDVSQEQELKATHQTVARVRRALRNG 314
            LYP D ED ++L++HAD AMY AK  GR  Y  F  S  +      +    +RRA+   
Sbjct: 665 ALYPADGEDGESLLKHADVAMYAAKDGGRAAYRFFIASHNERSLERLELENDLRRAVEGE 724

Query: 315 ELCLYYQPKVNLRTGKVLGFEGLLRWQRPGRGVVPPGDFLPWVEQTDLIVEIGEWVIGQA 374
           +L LYYQP++   +G++ G E L+RW+ P RG+V P  F+   E   LI  IG W +  A
Sbjct: 725 QLLLYYQPQIGASSGRIAGVEALVRWRHPTRGLVMPDSFIALAENAGLIDAIGHWCLVAA 784

Query: 375 LSQLQAWQRQGQPW-SLSVNIAARHLQRSDFAERLQQLLAAYPAVDPALLDLEIVESVAI 433
             QL+AWQ QG P   ++VN++AR L+R DFA+ + Q++     +DPA L+LE+ ES   
Sbjct: 785 CRQLRAWQEQGVPVPRVAVNVSARQLRRWDFAQEVLQVV-TQSGIDPAGLELELTESSLA 843

Query: 434 DNLQHVSRCLDACRALGVRFSLDDFGTGYSSLSYLKRLPTQTIKIDQSFVRDILHDQDDL 493
           D+ + +       R  GVR S+DDFGTGYSSLSYL R P   +KID+SFV  +L D++  
Sbjct: 844 DDPEQILAIFSTLRQAGVRVSIDDFGTGYSSLSYLSRYPVDEVKIDRSFVSRLLDDREAR 903

Query: 494 ALTEAVIGLARAFGREVIAEGLESVEHGRVLMGLGCELAQGYCIARPMPASDV 546
           ++  AVI LA   G   +AEG+E+    +VL  L C+  QGY  ++P+P   +
Sbjct: 904 SVVRAVILLAHGLGMRTVAEGVETEAQWQVLSDLDCDELQGYLFSKPVPPHQI 956



 Score = 32.0 bits (71), Expect = 1e-04
 Identities = 25/78 (32%), Positives = 36/78 (46%)

Query: 19  DLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWRALVAGRVWKGEIC 78
           D  G IT+ NQ+  ++ G +   LLG +   +      P    G+ RAL  G V++GE  
Sbjct: 305 DRGGRITFANQRAEALLGAAPGGLLGRDAATVLWPGAAPAEVSGLARALATGAVFEGEDD 364

Query: 79  NRSKDGSLYWVDSTMVPL 96
               DGS + V     PL
Sbjct: 365 FVRSDGSAFPVAVLGAPL 382