Pairwise Alignments

Query, 436 a.a., C4-dicarboxylate transport protein from Pseudomonas putida KT2440

Subject, 450 a.a., sodium:C4-dicarboxylate symporter (dctA) (from data) from Pseudomonas fluorescens FW300-N2C3

 Score =  408 bits (1049), Expect = e-118
 Identities = 205/409 (50%), Positives = 291/409 (71%), Gaps = 1/409 (0%)

Query: 7   RSIFLQVVLGLALGIACGLSFPDLSLQLKPLGDGFIKLIKMLIGLIVFCVVVSGISGAGD 66
           +S++ QV++ +A+GI  G  +P   + LKP GDGFIKLIKM+I  I+FC VVSGI G  +
Sbjct: 9   KSLYFQVIVAIAIGILLGHFYPQTGVALKPFGDGFIKLIKMVIAPIIFCTVVSGIGGMQN 68

Query: 67  LKKVGRIGLKSVIYFEVLTTLALVIGLVFAFTSGIGSGANIHLDQLSAADANGLAERGQH 126
           +K VG+ G  +++YFE+++T+AL+IGLV       G+G +I +  L  +   G    G+ 
Sbjct: 69  MKSVGKTGGYALLYFEIVSTIALLIGLVVVNVVQPGAGMHIDVSTLDTSKIAGFISAGKD 128

Query: 127 IHGATAFFMDLIPTSVIGAFADNNILQVLLFSVLFGSALNLVGDSAAGISRLINELSHVI 186
                AF +++IP +++GAFA+ +ILQVL+FSVLFG AL+ +G     +   I+  +HV+
Sbjct: 129 -QSIIAFILNVIPNTIVGAFANGDILQVLMFSVLFGFALHRLGAYGKPVLDFIDRFAHVM 187

Query: 187 FRIMGMIVRLAPIGVFGAIAFTTSKYGLASLQHLGGLVALFYLTCAGFVLIVLGTVMRLS 246
           F I+ MI++LAP+G FGA+AFT   YG+ SL  LG L+  FY+TC  FVL+VLG + R  
Sbjct: 188 FIIINMIMKLAPLGAFGAMAFTIGAYGVGSLVQLGQLMICFYITCVVFVLVVLGAICRAH 247

Query: 247 GLKLLPLIKYLREELTIVLGTASSDAVLPQIMRKLEHLGIGSSTVGLVIPTGYSFNLDGF 306
           G  ++ LI+Y+REEL IVLGT+SS++ LP+++ K+E LG   S VGLVIPTGYSFNLDG 
Sbjct: 248 GFSVIKLIRYIREELLIVLGTSSSESALPRMLIKMERLGAKKSVVGLVIPTGYSFNLDGT 307

Query: 307 SIYLTLAIVFIANATGTPLEMTDLLTILLVSLVTSKGAHGIPGSALVILAATLTAVPAIP 366
           SIYLT+A VFIA AT TP+++T  +T+LLV L++SKGA G+ GS  ++LAATL+AV  +P
Sbjct: 308 SIYLTMAAVFIAQATDTPMDLTHQITLLLVLLLSSKGAAGVTGSGFIVLAATLSAVGHLP 367

Query: 367 VVGLVLVLAVDWFMGIGRALTNLIGNCVATVAIARWEKDIDLERAQNVL 415
           V GL L+L +D FM   RALTNL+GN VAT+ +A+W K++D ++ Q  L
Sbjct: 368 VAGLALILGIDRFMSEARALTNLVGNAVATIVVAKWVKELDEDQLQTEL 416