Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  300 bits (769), Expect = 1e-85
 Identities = 201/637 (31%), Positives = 336/637 (52%), Gaps = 17/637 (2%)

Query: 16  MNLKFRHKILLSAC-GVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGALTASSVQNWM 74
           M L  + K++ S    + V A AL        ++++ R  IE+  + +    A  + +W 
Sbjct: 11  MRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRA-IESESRNTLQAHAKGIGDWF 69

Query: 75  SGRILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLGQANGEFTQRPDAQMPAGY 134
            G+ L L+ L ++I ++     L   + Q   + +F  +Y G   GE  ++  +   A Y
Sbjct: 70  LGKQLALKGLREEI-ERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADY 128

Query: 135 DPRQRPWYGAAANAGQTVLTAPYQGA-VGGLMVTIATPVKSKRNGELIGVVGGDVTLDTL 193
           DPR R WY  A  AG+ + T PY    +  L+VT+A PV+ +  G+LIGV   ++ LD L
Sbjct: 129 DPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQ--GQLIGVAASNLALDKL 186

Query: 194 VEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPG---SNLRVAA---GMQD 247
           ++ + +++  G G+A L +  G+++  P +D ++K  +++      S L +AA    +  
Sbjct: 187 IKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQ 246

Query: 248 VTLDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLL 307
           +++DG+D+++    VA   +  W + + +D+      L+      I   L  +  +A L 
Sbjct: 247 LSMDGRDKVLMAEEVA---NTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLT 303

Query: 308 GLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISE 367
              +   ++ L  +  A+ DIAEG+GDLTRRL V+++DE G LA  FN+FV+R+H  +  
Sbjct: 304 SWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKN 363

Query: 368 VSSAT-RLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQ 426
           V   +  L         SA+ AS     +Q   T  VA A+ E+ +AT EIA NA + ++
Sbjct: 364 VREVSVALTQGADHAAASATQASKRIRTQQDEIT-MVATAVTEMASATAEIASNAENTAK 422

Query: 427 HASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQ 486
           +A+ + +    G   ++++  ++  L+Q ++ +   I  L    +EI  IL  I+GI++Q
Sbjct: 423 NATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQ 482

Query: 487 TNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHT 546
           TNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S EEI   I  LQ  +  AV  
Sbjct: 483 TNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSV 542

Query: 547 MNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQI 606
           M  S    E +V   NQ G  L ++++ I +I  M   +A+A EEQ+ V   +N++   +
Sbjct: 543 MTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESV 602

Query: 607 NALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643
             ++ Q  E   ++++    L   A  L + +  F++
Sbjct: 603 REVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639