Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  325 bits (832), Expect = 5e-93
 Identities = 210/603 (34%), Positives = 315/603 (52%), Gaps = 19/603 (3%)

Query: 18  LKFRHKILLSACGVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGALTASSVQNWMSGR 77
           ++F  KI+ ++  +++   AL +    + Q +T+R+ IE+ VQ S       V+N +   
Sbjct: 1   MRFSQKIVAASSALLLCVIALLS----FQQLSTVREEIESLVQDSLMEMVKGVKNTIESD 56

Query: 78  ILVLENLAQDIGQQGAGDTL-----AGLIEQPSYTRNFLFTYLG-QANGEFTQRPDAQMP 131
           +   + LAQ   +    D         ++E P+   +FL   LG +++    +  D   P
Sbjct: 57  LASKKGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEP 116

Query: 132 -AGYDPRQRPWYGAAANAGQTVLTAPYQG-AVGGLMVTIATPVKSKRNGELIGVVGGDVT 189
            A YDPR+RPWY  A    + V+T PY   +   ++++I TPV  + N   +G +  DV 
Sbjct: 117 NADYDPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSN--FVGAMFYDVE 174

Query: 190 LDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAGMQDVT 249
           L  L +++NSV+    G+ F+   +G  I  PN +   +      P  +L+   G Q + 
Sbjct: 175 LTQLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLK--EGTQRIE 232

Query: 250 LDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLLGL 309
           LDG+  ++ FA V   PS  WYIG  +D   A+A +   R S++I  +I V      L  
Sbjct: 233 LDGKYYLVKFAQV---PSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSF 289

Query: 310 LIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISEVS 369
           LI VLM PL  + RA+ D+A G+GDLT+RL      EF  LA  FN F E +   I  + 
Sbjct: 290 LIKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLK 349

Query: 370 SATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHAS 429
                +   +E+ V  ++ S     +Q      +A A++E+     E+A NA  A+  A 
Sbjct: 350 GIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAH 409

Query: 430 GASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNL 489
            A E +  G +VV +   ++ ALS RI ++  +++ L  +T  I  IL VI  I+ QTNL
Sbjct: 410 EADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNL 469

Query: 490 LALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNT 549
           LALNAAIEAARAGE+GRGFAVVADEVR LA RTQ+S  EI  MI  LQ G+      MN 
Sbjct: 470 LALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNE 529

Query: 550 SQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINAL 609
           S+ +++  VQ A  A E L  +   I  I  MN  +A+A EEQ+ V E +N +  +I  L
Sbjct: 530 SKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDL 589

Query: 610 NQQ 612
           + Q
Sbjct: 590 STQ 592