Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  293 bits (749), Expect = 2e-83
 Identities = 196/636 (30%), Positives = 327/636 (51%), Gaps = 18/636 (2%)

Query: 16  MNLKFRHKILLSACGVVVLAFALFTLYNDYLQRN-----TIRQNIEASVQQSGALTASSV 70
           MN+ F  K++  +  ++++  A F ++  Y          I   I   + ++    +  +
Sbjct: 1   MNVGFVKKLIFISSFILLVTVA-FVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKL 59

Query: 71  QNWMSGRILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLG-QANGEFTQR-PDA 128
           ++ +S    ++++++  I  +     +  +I   +  + FL T  G  +NG+  +  P+ 
Sbjct: 60  ESDISLASSIVDSISLRISDE---QYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNW 116

Query: 129 QMPAGYDPRQRPWYGAAANAGQTVLTAPYQGAVG-GLMVTIATPVKSKRNGELIGVVGGD 187
           +    YDPR R WY  A    +  +T PY    G   +V+I++PV    N   IG +  D
Sbjct: 117 EPEDDYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNN-FIGAMYFD 175

Query: 188 VTLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAGMQD 247
           V L  + + ++ ++    G+ F+    G+VI+  N D++ KN+KDIY G   R+  G   
Sbjct: 176 VDLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNG--FRLDKGKVV 233

Query: 248 VTLDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLL 307
           ++++G ++ +  +P+ G     W+I   ID   A  ++++ +   I    I +     +L
Sbjct: 234 LSVNGVNKWLYTSPILG---GDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLIL 290

Query: 308 GLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISE 367
             ++  LMSPL T+  A++DIA G GDLT++L      EF ELA  FN F E + + I +
Sbjct: 291 VFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQ 350

Query: 368 VSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQH 427
           + +    V D +EK  + +  S +  E+Q      +A A+NE+     E+A +A  A+  
Sbjct: 351 LKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADA 410

Query: 428 ASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQT 487
           A      +  G  VV E   A+  LS RI  S   ++ L  +TD I  +LDVI  I+ QT
Sbjct: 411 AKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQT 470

Query: 488 NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTM 547
           NLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ+S  +I  +I  LQ G++    +M
Sbjct: 471 NLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSM 530

Query: 548 NTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQIN 607
           + S++ ++  V+  NQ  E+++ V Q I  I  MN  +A+A EEQ+ V E +N +   I 
Sbjct: 531 DESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIK 590

Query: 608 ALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643
            L+ +  E  +      +    +     +L+  F+I
Sbjct: 591 DLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626