Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 646 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  264 bits (674), Expect = 1e-74
 Identities = 181/541 (33%), Positives = 280/541 (51%), Gaps = 15/541 (2%)

Query: 110 FLFTYLGQANGEFTQRPDAQMPAGYDPRQRPWYGAA-ANAGQTVLTAPYQGAVGGLMVTI 168
           + +   G  NG +   P+    + YDPR RPWY  A ANAG+TV +  Y  A    ++  
Sbjct: 112 YSYVSYGLINGSYIMTPEDPKMSNYDPRVRPWYKTAMANAGKTVRSDAYYWANDDAVLVS 171

Query: 169 ATPVKSKRNGELIGVVGGDVTLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNK-DQVM 227
                  + G   GVV  DV+L  L  I+  +  G  G+  L + NG V+V P + +   
Sbjct: 172 TIRAIPNKLGNPGGVVNIDVSLKQLTNIVKQIKLGESGYLMLMEKNGTVLVDPKQPEHNF 231

Query: 228 KNLKDIYPGSN--LRVAAGMQDVTLDGQDRIISFAPVAGLPSAQW-YIGLSIDRDKAYAA 284
           K L ++  G +   + A+G+ +VTL+G+  +   A V       W +IGL I +D+  A+
Sbjct: 232 KKLGELGDGFSELAKTASGLVEVTLNGERYM---ANVYSSEQLGWNFIGL-IKQDEVMAS 287

Query: 285 LSQFR--TSAIIAMLIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQ 342
            ++       I A+L  V AI G       V++ P+ ++   +  IA GEGDLT+ LAV+
Sbjct: 288 ATRLTWLIGIIAAVLAVVFAIVG--ASFARVIVRPIHSVSSGLEGIAGGEGDLTQNLAVR 345

Query: 343 NKDEFGELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNS 402
            KDE  +LA  FN+F+  I + I  +  A   + + S      SN     +  Q    + 
Sbjct: 346 GKDETAQLAGWFNKFLTAIRSLIQHIGQAAGKILEASHSSTRVSNDMAEAAGRQREAVDM 405

Query: 403 VAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQ 462
           V+ A +E+ A + E+AR+ + A+  A    +QA  G+  +++A+ ++  LS+ ++ S   
Sbjct: 406 VSTAFHEMVATSNEVARSCSQAADSADNGQQQAREGQRQIDDAVRSVDQLSEELTRSAKD 465

Query: 463 IETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRT 522
           +  L   +  I  IL+ I+ I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT
Sbjct: 466 MTQLEKDSAGIQSILNTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRT 525

Query: 523 QESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMN 582
            +S  EI  ++ +L   +      M+ S   S+Q+V    QA      + + +  I  MN
Sbjct: 526 SDSTAEIDSLLGNLAKRTASVAQQMHASLDVSQQSVTKIGQARSSFGQIRESVDVIRDMN 585

Query: 583 QSVATATEEQTAVVESLNLDITQINALNQQGVENLNETLR-HCDQLAQQAGRLKQLVGSF 641
             +ATA EEQ  V E +N  I+QI+  + Q +  L+++ R     L   +  L  LV  F
Sbjct: 586 TQIATAAEEQHQVAEDINRHISQIHG-DAQLIAQLSDSARADSRSLEMLSSELDGLVRKF 644

Query: 642 R 642
           +
Sbjct: 645 K 645