Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 707 a.a., chemoreceptor methyl-accepting chemotaxis transmembrane protein from Sinorhizobium meliloti 1021

 Score =  342 bits (878), Expect = 3e-98
 Identities = 236/707 (33%), Positives = 353/707 (49%), Gaps = 91/707 (12%)

Query: 6   PPLIGSRSRNMNLKFRHKILLSACGVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGAL 65
           PPL GS + +       +IL++A  VVV AFA F++Y D LQR T  + +E  +  SG  
Sbjct: 2   PPLSGSPTLSKRSNLMTRILVAASCVVVGAFAGFSVYIDSLQRATTTKAVEEDIASSGNQ 61

Query: 66  TASSVQNWMSGRILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLGQANGEFTQR 125
            A SV NW++GR+ +    A   GQ      +  +++    T  F+ TY+G  +G+F   
Sbjct: 62  AAQSVANWLNGRVTLTAMAADAAGQVADEAAIGSVLKNDVLTGEFISTYVGNESGQFMIW 121

Query: 126 PDAQMPAGYDPRQRPWYGAAANAGQTVLTAPYQGAVGG-LMVTIATPVKSKRNGELIGVV 184
           PD++MP GYDPRQRPWY  A  A   VLT PY  A  G L+++ A PVK +  G+L GV 
Sbjct: 122 PDSKMPDGYDPRQRPWYQQAVKADARVLTEPYVDASSGDLIISAAVPVKHE--GKLYGVT 179

Query: 185 GGDVTLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAG 244
           G D +L  LV ++N +D GG G AFLA+ +GQ++V PN   V K L D +P     +  G
Sbjct: 180 GSDFSLKALVSMVNGIDVGGEGFAFLANKDGQILVHPNAKLVTKTLADAFPVDPPAIGTG 239

Query: 245 MQDVTLDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAA-I 303
           +    LDG+  ++SF PV GLPS +WY+G ++D D AY+A+SQFR +A IA ++AV A I
Sbjct: 240 IMHTELDGKPMLVSFVPVKGLPSVEWYVGFALDADVAYSAISQFRVAATIATILAVGAMI 299

Query: 304 AGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSF--------- 354
           A L  LL  +++ P+T M  AM  +A G  D+T     + +D+ G +A +          
Sbjct: 300 AFLATLLSRLVIRPVTDMTGAMEKLAAGSLDVTIP-GEERRDQIGSMAAAVAVFRANAVE 358

Query: 355 ----------NRFV---ERIHASISEVSSATRLVH---------------DLSEKVVSA- 385
                     NR +   ER+     +   A  + H               DL+ ++ S  
Sbjct: 359 RKRLEDEADSNRSLSERERLEREAQKTRDAAEVQHAVDALATGLGRLADGDLAYRIGSPF 418

Query: 386 ----------SNASIIGSEEQSMRTNSVAAAIN----ELGAATQEIARNAADASQHASGA 431
                      N S+    +      + A AI+    E+ +A  ++AR      Q A+  
Sbjct: 419 ADRLDRLREDFNNSVAKLHDTLCAVGANARAIDAGATEIRSAADDLARR---TEQQAASV 475

Query: 432 SEQAHGGREVV---------EEAISAMTALSQRISESCAQI--------ETLNASTDEIG 474
            E A    E+           E + A+ A ++  +E   ++          +  S+ EI 
Sbjct: 476 EETAAALEEITTTVRDSAHRAEEVGALVARTRAGAEKSGEVVQNAVEAMHAIEKSSGEIS 535

Query: 475 KILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMIT 534
            I+ VI  I+ QTNLLALNA +EAARAGEAG+GFAVVA EVR LA R+  +A+EI  +IT
Sbjct: 536 NIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKALIT 595

Query: 535 SLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTA 594
           +    S E VH+           V +    G  L ++   + EI+    ++ TAT EQ+ 
Sbjct: 596 T----SGEQVHS----------GVTLVGDTGRALQAIVAEVQEINKHVSAIVTATREQST 641

Query: 595 VVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSF 641
            ++ +N  +  ++   QQ    + +       LA +A  L  L+  F
Sbjct: 642 GLQEINTAVNTMDQGTQQNAAMVEQQTAASHGLASEAAALNALLAQF 688