Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 665 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  249 bits (637), Expect = 2e-70
 Identities = 166/541 (30%), Positives = 268/541 (49%), Gaps = 23/541 (4%)

Query: 119 NGEFTQRPDAQMPAGYDPRQRPWYGAAANAGQTVLTAPYQGAV-GGLMVTIATPVKSKRN 177
           NG +   P+      Y   +RPW+  A + G   +  P   A  G +  T+ TPV    N
Sbjct: 132 NGRYDGDPN------YYTNKRPWWQEALDKGGLFVGDPAVDANDGSISATVKTPVYGA-N 184

Query: 178 GELIGVVGGDVTLDTLVE-IINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPG 236
           G+L+G+ G D+ +DT+ + ++  + + G G AFL   +G+++  P  ++       I   
Sbjct: 185 GQLLGIGGMDILIDTIGKSLLAPIKYQGSGQAFLMTGDGKLVYFPGFNESFPPGSAIQKV 244

Query: 237 SN-------------LRVAAGMQDVTLDGQDRIISFAPVAG-LPSAQWYIGLSIDRDKAY 282
            N              R ++G  DV   G  + ++F  VAG  P  +W++   +  +   
Sbjct: 245 DNNGSEGFTALGQLMQRQSSGFTDVVYQGSPQRVAFVEVAGDYPKQKWHLAFMLPHEVIE 304

Query: 283 AALSQFRTSAIIAMLIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQ 342
           A +     +A +  L  +  +   + LL+  L   L ++  AM ++A GEGDL+RR+ +Q
Sbjct: 305 APVRDAFWNACLMSLGIILLVGVTVWLLLLPLRRQLESLLGAMDNMASGEGDLSRRIDIQ 364

Query: 343 NKDEFGELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNS 402
            +DE G +A +FNRF  ++   + +    TR V D   +     + ++     Q  + +S
Sbjct: 365 REDELGLMADAFNRFAAKVQQMLRQTRDLTRDVDDGIVEARKICDVAVGAVSRQKAQIDS 424

Query: 403 VAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQ 462
           VAAA  E+   +QE+A +A   +  A  A  QA  G+++V EA S +  LS R+ E+ A 
Sbjct: 425 VAAAAIEMAHTSQEMAASAQRTADFAETAQTQADDGKQIVAEATSGIETLSSRVIEAAAV 484

Query: 463 IETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRT 522
           I+ L  S+++IG++L VI+ I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT
Sbjct: 485 IKELRGSSEKIGEVLSVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRT 544

Query: 523 QESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMN 582
           Q+S   I  +I  LQ  + EA   M      +++   + +Q  + L  +T  IG I    
Sbjct: 545 QDSTANIQGIIQRLQQSAMEAESVMEAGVNDAKRGQLLTSQVQDSLGKITDAIGAILQQT 604

Query: 583 QSVATATEEQTAVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFR 642
             +  A  +Q  V + +  ++  +  L+        E         Q    L   +  FR
Sbjct: 605 TEITVAIGQQAVVADEVAQNVENVRGLSDDSHSASQELAVSLKAFEQLTHALSGNISQFR 664

Query: 643 I 643
           +
Sbjct: 665 V 665