Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  250 bits (638), Expect = 2e-70
 Identities = 152/469 (32%), Positives = 252/469 (53%), Gaps = 7/469 (1%)

Query: 178 GELIGVVGGDVTLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGS 237
           G+  GV G  ++L++L + I     G  G  +L D NGQ+ +        K L  +    
Sbjct: 174 GKPSGVAGVGLSLNSLADNIKQYKIGEQGRVYLTDGNGQIKIHGQSQFAGKQLSALGIKD 233

Query: 238 NLRVAAGMQDVTLD----GQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAI 293
              + +     T +    G D +++   +   PS  WY+   + +D+ + A+++      
Sbjct: 234 PQALLSQQTFATSEYDNNGVDTLVASRYI---PSIGWYLIAEVPQDELFGAINKASWQLA 290

Query: 294 IAMLIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATS 353
           +  LI  A I      LI  L+SP   +   ++ I EGEGDL+ RL    +DE G +A S
Sbjct: 291 LMGLILAAIIMFTSAWLINRLISPFGELADMLKSIGEGEGDLSLRLDDSRQDETGSMAAS 350

Query: 354 FNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAA 413
           +N+FV  +  ++  VS+    +    E++ + +        +Q  +   VA AI+E+G  
Sbjct: 351 YNQFVTYLSKTLQSVSATANDLFQAVERIDNQAKHMEHEINDQVSKIEQVATAIHEMGMT 410

Query: 414 TQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEI 473
            QEIA +A +A+++A  A +  + G + V+  I+++ ++S+++  +   +  L      I
Sbjct: 411 AQEIASSANNAAENAQVADQSVNQGNQSVQNTIASVASMSEQLLTTSETVSQLAEDASSI 470

Query: 474 GKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMI 533
             +L+VI+G+S+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA R+  S E+I  +I
Sbjct: 471 DTVLEVIRGVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSHASTEDIRHII 530

Query: 534 TSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQT 593
             LQ  + E V+ +  S   S+Q+ Q A+ +GE L S+ + I  +  M+  +ATATEEQ+
Sbjct: 531 EKLQAKTTEVVNAIGQSTNQSQQSQQEASLSGEHLHSIAENIQAMSEMSMQIATATEEQS 590

Query: 594 AVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFR 642
            VV  +N  +T I  +++   + + +T   C  L + A +L +LV  F+
Sbjct: 591 NVVGEINPHVTAIADISRSSSDVVRQTSLDCSDLREMAVQLNELVSRFK 639