Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  254 bits (649), Expect = 8e-72
 Identities = 161/525 (30%), Positives = 284/525 (54%), Gaps = 24/525 (4%)

Query: 130 MPAGYDPRQRPWYGAAANAGQTVLTAPY-QGAVGGLMVTIATPVKSKRNGELIGVVGGDV 188
           +P  YDPR RPWY       Q  +T  Y     G  +++I      K  G+  GVV GD+
Sbjct: 120 IPGKYDPRTRPWYQQGKATTQLDVTDIYIDDGSGHKVISIL-----KNLGD--GVVLGDI 172

Query: 189 TLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIY--PGSNLRVAAG-- 244
            L  L ++++++D+ G   A + D  G+V+ S +   V  +    +  P    ++     
Sbjct: 173 ELTYLHDVVSAIDYPG-AVALITDQTGKVLASESPTLVSGSRFSDFGLPQVQQKIIGSDE 231

Query: 245 -MQDVTLDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAV-AA 302
            MQ+  +DG D++     +  +   QW++ + +D+  AYA + Q  TSA+++  I +  A
Sbjct: 232 VMQEYRIDGVDKLGFSKAIPLVNGKQWFLFIGLDKSNAYAVVDQALTSALVSSAIMLLCA 291

Query: 303 IAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIH 362
           I+ LLG+L  +L  P+ ++   + ++++G GDLT+RL +  +D+ G+++   N+F+  + 
Sbjct: 292 ISILLGVLY-LLYRPILSLKAMVTELSKGNGDLTKRLEIHCEDDLGQISMGINQFIANLQ 350

Query: 363 ASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAA 422
           A + EV  A+  +    E++   +  +       +  T  + AA+ E+ A   ++A+N +
Sbjct: 351 AMMREVLQASAHISGSVERLNGETETNRHILSAHTKETEQIVAAVEEMSATANDVAQNGS 410

Query: 423 DASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKG 482
           + +      +EQA   ++VV +A   +  L + +  +  +I  ++  T  I ++L VI  
Sbjct: 411 ETASFTQLTNEQALASKQVVAQATETVNRLVREVEHTADKIGQIDRDTINITQVLKVIGD 470

Query: 483 ISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSRE 542
           I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+S  EI   +++L+  S  
Sbjct: 471 IADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTAEIEETLSNLRDASNS 530

Query: 543 AVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLD 602
           A+H+M  ++ +  +T     +    L ++   + +I+ +N  +ATA EEQ++V   +  +
Sbjct: 531 AIHSMEVTKQTCLETASTTERVATDLDAIGSSVNQINDLNTQIATAAEEQSSVSAEITRN 590

Query: 603 ITQI----NALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643
           ++ I    N L + G  + NET+     LA    +L+Q+VG F++
Sbjct: 591 MSAICDMANELARSGESSRNETV----NLATANQQLEQIVGQFKL 631