Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 545 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  224 bits (570), Expect = 1e-62
 Identities = 153/502 (30%), Positives = 249/502 (49%), Gaps = 23/502 (4%)

Query: 161 VGGLMVTIATPVKSKRNGELIGVVGGDVTLDTLVEIINSVDFGGIGHAFLADANGQVIVS 220
           + G + +I + +   R     G +           +IN   + G+G+  L D N Q++  
Sbjct: 48  IDGQLGSILSVIDVYRQDAASGKMREQEAQKAAASLINQTRYAGVGYFILIDDNNQILAH 107

Query: 221 PNKDQVMKNLKDIY--PGSNLRVAAGMQDVTLDGQDRI-------ISFAPVAGLPSAQWY 271
                ++      +  P     +   +     +G+  +       +S      L  A++Y
Sbjct: 108 GESASMIGTSAQNFTLPNGTNPLTTLLSQARQNGKSTLEYPIANPVSKIVEDKLAEARYY 167

Query: 272 ----------IGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLLGLLIPVLMSPLTTM 321
                       LS  ++  Y  +  +    II  LI+V   A  L +L   + SPL   
Sbjct: 168 PQWGWTLITGAYLSDVKESLYEVMVDY---LIIMFLISVPIFAFFL-VLNHSITSPLNDA 223

Query: 322 GRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISEVSSATRLVHDLSEK 381
             A+ DIA+GEGDL++RL+ Q KDE   LA +FN F ++I   +  +    + + + ++ 
Sbjct: 224 IEALEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDMVGHLQPLGQSLDNDAKL 283

Query: 382 VVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASGASEQAHGGREV 441
           ++ A   S   +E     T SVA A+N++ + T E+A N   A+  A+    QA   + V
Sbjct: 284 LMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQAADAATSVKSQAQQSKGV 343

Query: 442 VEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARA 501
           ++  +     L Q +  S A  + L  ++ +IG ILDVI+ I++QTNLLALNAAIEAARA
Sbjct: 344 IDNTVRDTEKLVQELKASEAITQKLGQASGQIGSILDVIRAIAEQTNLLALNAAIEAARA 403

Query: 502 GEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVA 561
           G  GRGFAVVADEVR LA+RTQ+S  EI ++I+ +Q G    + + + +Q  SE+    A
Sbjct: 404 GSHGRGFAVVADEVRALANRTQDSTNEIQKIISEIQTGVGSVMQSNSQTQRQSEELQAKA 463

Query: 562 NQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQQGVENLNETL 621
            +AG+ +A++ + I  I  MN  +A+ATEEQ+ V E +N +I  I+ L +  V+      
Sbjct: 464 QEAGQAMAAILELIAHISDMNTQLASATEEQSLVTEEINRNICNISELTEVSVKANESNS 523

Query: 622 RHCDQLAQQAGRLKQLVGSFRI 643
           R    L   +  +   +G F+I
Sbjct: 524 RAAQSLQDISQDMSHTLGQFKI 545