Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 677 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  228 bits (581), Expect = 7e-64
 Identities = 178/685 (25%), Positives = 316/685 (46%), Gaps = 76/685 (11%)

Query: 16  MNLKFRHKILLSACGVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGALTASSVQNWMS 75
           M    R++ L+    ++V    +      Y+   T  +N+EA++ QS  L    +   +S
Sbjct: 1   MRWNLRNRFLVPIISILVFGMGVTA----YIAYTTASRNLEAALMQSSILVRDMLSRELS 56

Query: 76  GRILVLENLAQDIGQQGAGDTLAGLIEQPS--YTRNFLFTYLGQANGEFTQR------PD 127
             +   E+   DIG Q   D  A ++  P+  +T+  +           T +      PD
Sbjct: 57  TTV---EDSQSDIGSQAKRDEFARVLSDPTPEHTKKAVQALRDTLEEYSTYQSLAVVGPD 113

Query: 128 AQMPAGYDPRQ--------RPWYGAAANAGQTVLTAPYQGAVGGLMVTIATPVKSKRNGE 179
             + A              R ++  A      V  A         +  +A+PVK  R+G 
Sbjct: 114 GVVVASNRQEDIGKVNLGSRDYFKTAIQGTPAVSDAVLSKVNNKPVFVVASPVK--RDGR 171

Query: 180 LIGVVGGDVTLDTLV-EIINSVDFGGIGHAFLADANGQVIVSPNKDQVMK-NLKDI-YPG 236
           +IGV+ G + L     E+I+ +  G  G+AFL    G +   P+K  ++  NLKD  +  
Sbjct: 172 VIGVIYGAIDLARFATEVIDPIRIGKTGYAFLVSKAGFIAAHPDKSHILTLNLKDEPWAA 231

Query: 237 SNLRVAAGMQDVTLDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAM 296
              R  +G  + T  G+D+I+ +          W + +++D D+   +++  R + +   
Sbjct: 232 PMFRNPSGEVEYTFKGKDKILVYTTEK---RTGWQLAVTVDMDEINESVAAIRNTTLAVG 288

Query: 297 LIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNR 356
           +I +   + ++ L++  +++ L       R +A+G  DL + LA+  +DE G LA +   
Sbjct: 289 IIMLLVTSVVVFLIVRSIVNALNKGVDFARAVADG--DLGQDLALTRQDEIGTLAEALRV 346

Query: 357 FVERIHASISEVSSATRLVHD------------------------------------LSE 380
            V R+   I+   + T+   +                                    + E
Sbjct: 347 MVRRLKEMIATSEAKTQEAEEQTRKAEVATREAEAARAQAENARREGLLLAASQLEGIVE 406

Query: 381 KVVSASNA-------SIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASGASE 433
           ++ SAS         +  GS  Q  RT   A A+ E+ A+  EIARNAA+A++ +  A  
Sbjct: 407 RISSASEELSAQVEQAARGSSTQLQRTTEAATAMEEMNASVMEIARNAAEAAESSEHARR 466

Query: 434 QAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLALN 493
           +A  G  VV   + A++ +  +  E    ++ L    + IG+I+ VI  I+ QTNLLALN
Sbjct: 467 EADEGASVVGSVVEAISDVDAKTGELKLSLDMLGTRAENIGQIMTVITDIADQTNLLALN 526

Query: 494 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQVS 553
           AAIEAARAGEAGRGFAVVADEVR LA +T  + +E+   + ++Q G+++ +  M+ + +S
Sbjct: 527 AAIEAARAGEAGRGFAVVADEVRKLAEKTMNATKEVGEAVRAIQSGTKDNIRGMDEAAMS 586

Query: 554 SEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQQG 613
             ++ ++A+ AG+ LA +   I       +++ATA+EEQ+A  E +N    ++N +  + 
Sbjct: 587 VGRSTELASIAGDALARIVGLIEGSADQVRAIATASEEQSAASEQINRGTDEVNRIASET 646

Query: 614 VENLNETLRHCDQLAQQAGRLKQLV 638
              + E  +   +L+     L+ L+
Sbjct: 647 AGAMGECAKAMTELSAMTQELRSLI 671