Pairwise Alignments

Query, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

Subject, 623 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  313 bits (801), Expect = 2e-89
 Identities = 207/634 (32%), Positives = 328/634 (51%), Gaps = 32/634 (5%)

Query: 21  RHKILLSACGVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGALTASSVQNWMSGRILV 80
           + KIL+S    + L  +L +  +   Q++ + QN    VQ+ G   A  +Q W++GR  +
Sbjct: 7   KQKILISVVIALSLVISLLSWQSYSSQKSLLLQNSLEQVQRLGEQQAERIQEWLAGRQDI 66

Query: 81  LENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLGQANGEFTQRPDAQMPAGYDPRQRP 140
           +  LA  +      D     ++Q   +  F  TY G   G+      +    GYDPR RP
Sbjct: 67  VGALASKVE-----DNSLSALQQAQASGRFQLTYYGTETGQMLDSDPSIDRTGYDPRTRP 121

Query: 141 WYGAAANAGQTVLTAPYQGAVGGLMVTIATPVKSKRNGELIGVVGGDVTLDTLVEIINSV 200
           WY  A N    +LT PY      ++V       S+      GVVGGD+++ +LVE +N +
Sbjct: 122 WYKQAMNERGLILTKPYVDVAYNVLVVTMAQATSQ------GVVGGDLSIASLVESVNRM 175

Query: 201 DFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAA-GMQDVTL-------DG 252
                G+A +   +G VI   +  + MK +  I    N  +     Q  TL       +G
Sbjct: 176 TLPANGYAIMMHKDGTVIAYKDASKAMKPVGQIDNDLNHDLPQQSRQAGTLLPMYFENEG 235

Query: 253 QDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALS-----QFRTSAIIAMLIAVAAIAGLL 307
           +D+++    +   P+  W + + +D++   A L+     QF  SA++ +L++V AI+ L+
Sbjct: 236 RDKLVWGVDI---PNTDWELVIVLDKETLEAPLTDLLLTQFGLSAVV-LLLSVLAISWLV 291

Query: 308 GLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISE 367
            LL+     PL  + +A+  IA+G GDLT+R+ V  +DE G LA SFNRFV   H  IS 
Sbjct: 292 NLLL----GPLGRVSQALARIADGNGDLTQRIEVDTQDEVGVLADSFNRFVGSQHQLISH 347

Query: 368 VSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQH 427
           +      +   +E+ +  ++ ++   + Q      VA A+ E+ +AT EIA NA + +  
Sbjct: 348 IRQLASELDADAERSLKTNHIAVAELQRQQQEVAMVATAVTEMASATNEIAANAENTATA 407

Query: 428 ASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQT 487
           A  ++  +  G+E+V +  S++ +L+  ++++   IE L+     I  IL  I+GI++QT
Sbjct: 408 AQQSAASSFQGKELVNKTRSSINSLADEVAQATDVIEDLSRHAQSISSILATIQGIAEQT 467

Query: 488 NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTM 547
           NLLALNAAIEAARAGE GRGFAVVADEVR L+ RTQ+S +E+H  I +LQ  + +AV  M
Sbjct: 468 NLLALNAAIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQEVHATIETLQRTTAKAVSLM 527

Query: 548 NTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQIN 607
            +SQ+ +  +V+ AN A + L  +TQ +  I  M   +ATA EEQT V   +  +   I 
Sbjct: 528 ESSQMLAGNSVEDANAAAKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIK 587

Query: 608 ALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSF 641
            +  +  E     L     L  +A  L   V +F
Sbjct: 588 DVTDEITEAAKSDLTQAQALKARANDLNAQVATF 621