Pairwise Alignments

Query, 197 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 192 a.a., XRE family transcriptional regulator from Methanococcus maripaludis JJ

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 6/168 (3%)

Query: 13  VGQRLRQVRKARQMTLKQLSEASGVPLSTLSKMELAQVSVSYEKLAAAARALNVDIAQLF 72
           VG +++Q+R+ + M++++L++ S   +  +  +E   +  S   L   ARAL V +    
Sbjct: 7   VGIKIKQMREGQNMSIEELAQESNSSVKLIENLENGDLIPSLTPLFKIARALGVRLGTFL 66

Query: 73  RASGTVSAPVPVTVVVDSLPAAAGYSTGT----YDYYPIAGDFPARRMTPAYARIIARER 128
             +      +  +   DS+   +G   GT     D+Y +A +   R M P    +   E 
Sbjct: 67  DDAPQNGPVLTRSGSSDSIVRFSGKLDGTKDSKLDFYALAAEKQDRHMEPFLIDVYPIES 126

Query: 129 GQFDDFIRHPGQEFALVLSGRVRIEFETGEAVSIGPQETAYFDSQVGH 176
            ++     H G+EF  V+ G + + +   E   +   ++ Y+DS V H
Sbjct: 127 NEYK-LSSHEGEEFIYVMDGEIEVMYGQ-EKYMLKKGDSIYYDSIVPH 172