Pairwise Alignments

Query, 626 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 665 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  317 bits (811), Expect = 1e-90
 Identities = 200/568 (35%), Positives = 298/568 (52%), Gaps = 31/568 (5%)

Query: 72  AGPYFSF----RRSWRPLLVFALLLVLTLFSVRLNVLFSFWYNGFYSALQGLDQAAFWYL 127
           AG + +F    R  W P L+   L+ L      +NV  +F      ++L   +QA+FW  
Sbjct: 106 AGVFAAFWRKIRHRWLPWLMLGGLIFLLFAINGINVGITFIARVLDNSLVAKEQASFWQF 165

Query: 128 LGVFAVLATIHVLRSLFTFYVSQAFSIKWRVWLTERLTHDWMQGDAYYR--GQFLAEPVD 185
           LG++ +   I +       Y+     + WR WLT+     +     YYR         VD
Sbjct: 166 LGIYVLTLVIALPVRGALSYLPLKLGLLWREWLTDDFLRRYFGNRVYYRLDSNSADTAVD 225

Query: 186 NPDQRIELDVNAFVTNSVSLALGAVSALVSLVAFTGILWGLSAPLTVAGVEIPRAMVFAV 245
           NPDQRI  DV AF   ++S  +    A+++L++FT ILW +S  LT+            +
Sbjct: 226 NPDQRITEDVKAFTDTTLSFLIQVFDAVLTLISFTAILWTISKQLTLG-----------L 274

Query: 246 YLYVIIATWVAFRLGRPLIRLNFLNEKLTANFRYALMRLRENAENIAFYQGAQVERGTLL 305
             Y +I T ++   G  LIR+NF   +L ANFRY ++ +R+NAE IAFYQG   ER  + 
Sbjct: 275 LAYAVIGTAISVLAGTKLIRINFDQLRLEANFRYGMVHVRDNAETIAFYQGEAQERRQVR 334

Query: 306 GRFAALIVNVWALVYRNLKFSGFNLGVSQVAVVFPFILQAPRFFSGAIKLGDVMQTSQAF 365
            RF  +++N   L+  N   S +       + + P+++  P +FSG    G + Q+  AF
Sbjct: 335 DRFGQVLLNFDRLIIWNTILSVYQRFYDYFSRIPPYLIVVPLYFSGQQDFGVISQSILAF 394

Query: 366 GQVQDSLSFFRESYDAFAQYRATLDRLTGF------LDANQQASALPRVTTEDQAHALQI 419
            Q+  +LS         +++ A ++RL  F      ++  +     P+++TE     L++
Sbjct: 395 SQILGALSIITYQIQEISRFAAGVNRLGSFEQVMRTVERTETDRNRPQISTE-YGPLLRL 453

Query: 420 TGLQVLRPDGH-ALIADLDLSLHAGQALLIKGPSGSGKTTLLRALAGLWPYAEGKVRRPT 478
             + +  PD    L+ DL+LSL   +ALLI GPSG GKT+LLRA+AGLW   +G++ RP+
Sbjct: 454 VDVTLETPDYRKVLVKDLNLSLADQEALLIVGPSGFGKTSLLRAIAGLWNSGQGQIERPS 513

Query: 479 GHQALFLSQRPYLPLGDLRTVIAYPAASNPKDELLMQQALRQVNLAHL----AERLDVSC 534
               LFL QRPY+ LG+LR+ + YP A     +  +  AL +VNL ++     E  D   
Sbjct: 514 TQDILFLPQRPYMLLGNLRSQLVYPHAPGRFSDAELLDALERVNLRYILDDRPEGFDALE 573

Query: 535 DWSHILSVGEQQRLAFARVLFNRPQVVFLDESTSAMDEGLEHALYALLRSEMPSALLVSV 594
           DWS + S+GEQQRLAFAR++ +RP+   LDE TSA+D   EH +Y LLR+   S   VSV
Sbjct: 574 DWSSVFSLGEQQRLAFARIVLSRPKFAILDEGTSALDVANEHRVYTLLRNLGIS--YVSV 631

Query: 595 GHRSTLAAFHTHRLEVDGHGGWSLLEQE 622
           GHR TL  FH   LE+     W  L  +
Sbjct: 632 GHRPTLCDFHETVLEILPESQWRTLSAD 659