Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 332 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score =  356 bits (914), Expect = e-103
 Identities = 182/320 (56%), Positives = 225/320 (70%), Gaps = 2/320 (0%)

Query: 11  LDIGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQA-DETGQLLPASD 69
           L+IGLLLYPG Q AAV+GL DLF VANR+AAE GA +LP +RV+ W   D T  +    D
Sbjct: 8   LEIGLLLYPGAQLAAVYGLTDLFSVANRMAAERGAAKLPTLRVTHWSLQDGTSGIQRVFD 67

Query: 70  NSAVTVPGLRVLIIPPSLESAPQAELLERHRAPLCLLHGRGTVLASVCIGVFFIAASGLL 129
           +   +    R++I+PP LE+ P+A +++   A L   H  G  L SVC G F +A +GLL
Sbjct: 68  SLPGSQRSPRIIILPPCLEARPEAHVIQPFAAWLGQCHQAGVTLGSVCAGAFLLAETGLL 127

Query: 130 DGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRLLERFLGTT 189
           DGR   THW    AL +RFP V+V+A + ++DDGDI+T+ GLMAWTDLGL L+ER LG T
Sbjct: 128 DGRTVTTHWGLAQALRERFPNVQVDADRMIVDDGDIITAGGLMAWTDLGLALVERLLGPT 187

Query: 190 VAQETARYLAVDPVA-APLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDADLATMAACAG 248
           +A ETARYL +D    +    + F PRLDHGDEAVL+VQ WLQ        +A MAA AG
Sbjct: 188 IASETARYLVIDLTRQSQRYFSSFAPRLDHGDEAVLRVQRWLQSQSASAVPVAAMAAQAG 247

Query: 249 LEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQDPGAFRKVF 308
           +  RTFLRRFRAATGL+PTEYCQQ+RVG+A  LLE T R +EQ+AW VGYQDPGAFRKVF
Sbjct: 248 MGERTFLRRFRAATGLKPTEYCQQLRVGKARELLELTNRGIEQVAWAVGYQDPGAFRKVF 307

Query: 309 QRVIGLTPSDYRRRFAVSGQ 328
           QR++GL+P DYRRRF    Q
Sbjct: 308 QRLVGLSPGDYRRRFGSGTQ 327