Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 342 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  135 bits (341), Expect = 1e-36
 Identities = 103/327 (31%), Positives = 149/327 (45%), Gaps = 16/327 (4%)

Query: 11  LDIGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQADETGQLLPASDN 70
           L+I +L+      + V    DLF  AN  A   G   +PH+    + A            
Sbjct: 9   LNIAILIPETPVMSGVTAFLDLFRHANTYAERTGQSGVPHVEPRVYSARGGWVSAEGIGI 68

Query: 71  SAVTVPGLRVLIIPPSLESAP---QAELLERHRAP-------LCLLHGRGTVLASVCIGV 120
            +V V  L +  +   + SAP       L R  A        +  L   G  +A+ C G 
Sbjct: 69  ESVPVSALDLTQVDALVISAPLILDGRDLHRELASFKAFEDHIKALADNGVPVAACCAGA 128

Query: 121 FFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLR 180
           F +AA+GLLDGR A T W       Q FP VR+     +  DG   T+    A   LGL 
Sbjct: 129 FLLAATGLLDGRKATTAWWLAPLFEQHFPEVRLSMVSLVERDGLFFTAGASTASYSLGLA 188

Query: 181 LLERFLGTTVAQETARYLAVDPVAAPLPGAVFNPRLD----HGDEAVLKVQHWLQGNGGQ 236
           LLE+ +    AQ  A+   +DP  +     VF  ++     H D  V  +  W+  N  +
Sbjct: 189 LLEQLVDEHFAQAMAKVFLIDPNRSSQ--RVFMDQVPLQPLHTDPQVADIMRWISNNLTE 246

Query: 237 DADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGV 296
           D  L ++A    +  RT +RRF+AA    P+ Y Q++R+ RA RLLE T   +E+I   +
Sbjct: 247 DLALESLAERFAMGKRTLIRRFKAALHDTPSSYIQKLRIDRAKRLLERTDLPLERILPEL 306

Query: 297 GYQDPGAFRKVFQRVIGLTPSDYRRRF 323
           GY+D  +FRK+F +   LTP  YR +F
Sbjct: 307 GYEDVSSFRKLFIQHTSLTPKAYREKF 333